RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 EPOP01588 193 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
LDB3-209ENST00000623056 HMGCS1Q01581 520 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 CHRNEQ04844 493 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 MFSD10Q14728 455 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 TBCEQ15813 527 aaPredicted RBP13.76□□□□□ -0.21
LDB3-209ENST00000623056 DDR2Q16832 855 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 FAM171A1Q5VUB5 890 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 MILR1Q7Z6M3 343 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 LRRTM3Q86VH5 581 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 PIANPQ8IYJ0 282 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 PSD4Q8NDX1 1056 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 CLHC1Q8NHS4 586 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 Q96MT0 163 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 IPPKQ9H8X2 491 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 SARS2Q9NP81 518 aaKnown RBP13.76□□□□□ -0.21
LDB3-209ENST00000623056 C14orf119Q9NWQ9 140 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 DKK3Q9UBP4 350 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 A0A1W2PQH9 124 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 MBLAC1A4D2B0 266 aaPredicted RBP13.76□□□□□ -0.21
LDB3-209ENST00000623056 A8MV72 311 aaPredicted RBP13.76□□□□□ -0.21
LDB3-209ENST00000623056 FFAR3O14843 346 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 GPR42O15529 346 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 ERN1O75460 977 aaKnown RBP13.76□□□□□ -0.21
LDB3-209ENST00000623056 ALX3O95076 343 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 ETV6P41212 452 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 SLC19A1P41440 591 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 MAGEA11P43364 429 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 IL10RBQ08334 325 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 ELP6Q0PNE2 266 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 NPRL3Q12980 569 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 MAD2L1Q13257 205 aaPredicted RBP13.76□□□□□ -0.21
LDB3-209ENST00000623056 CCDC58Q4VC31 144 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 MS4A13Q5J8X5 152 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 SPANXN2Q5MJ10 180 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 CACHD1Q5VU97 1274 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 PSAPL1Q6NUJ1 521 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 SUSD1Q6UWL2 747 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 HORMAD1Q86X24 394 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 SERPINB11Q96P15 392 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 DEPDC7Q96QD5 511 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 OR51E2Q9H255 320 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 TNKS2Q9H2K2 1166 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 SERHLQ9NQF3 203 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 FARSBQ9NSD9 589 aaKnown RBP13.76□□□□□ -0.21
LDB3-209ENST00000623056 SIRT5Q9NXA8 310 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 BOLA1Q9Y3E2 137 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 SAMHD1Q9Y3Z3 626 aaKnown RBP13.76□□□□□ -0.21
LDB3-209ENST00000623056 TTC3P53804 2025 aa13.76□□□□□ -0.21
LDB3-209ENST00000623056 CENPXA8MT69 81 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 WNT9AO14904 365 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 CCNDBP1O95273 360 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 SNAI1O95863 264 aaPredicted RBP13.75□□□□□ -0.21
LDB3-209ENST00000623056 KRT6CP48668 564 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 CACNB2Q08289 660 aaPredicted RBP13.75□□□□□ -0.21
LDB3-209ENST00000623056 ZNF235Q14590 738 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 BCL7AQ4VC05 210 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 LDLRAD1Q5T700 205 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 ZNF551Q7Z340 670 aaPredicted RBP13.75□□□□□ -0.21
LDB3-209ENST00000623056 P3H2Q8IVL5 708 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 GALNT12Q8IXK2 581 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 TTC16Q8NEE8 873 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 ST6GAL2Q96JF0 529 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 DMRTB1Q96MA1 342 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 TRIB3Q96RU7 358 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 ACBD6Q9BR61 282 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 TMEM246Q9BRR3 403 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 INPP5KQ9BT40 448 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 CENPOQ9BU64 300 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 MIOSQ9NXC5 875 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 PSORS1C1Q9UIG5 152 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 TNPO3Q9Y5L0 923 aaKnown RBP13.75□□□□□ -0.21
LDB3-209ENST00000623056 LYVE1Q9Y5Y7 322 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 PNMA8CA0A1B0GUJ8 204 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 H3BQ06 376 aaPredicted RBP13.75□□□□□ -0.21
LDB3-209ENST00000623056 TLL1O43897 1013 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 FABP3P05413 133 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 THP07101 528 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 ACVRL1P37023 503 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 UGT2B15P54855 530 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 CSNK2BP67870 215 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 VLDLRP98155 873 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 TSPY1Q01534 308 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 ABHD18Q0P651 414 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 LRRC26Q2I0M4 334 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 PARP15Q460N3 678 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 PAN2Q504Q3 1202 aaKnown RBP13.75□□□□□ -0.21
LDB3-209ENST00000623056 LRIF1Q5T3J3 769 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 PRR23CQ6ZRP0 262 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 GLT6D1Q7Z4J2 308 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 CCDC190Q86UF4 302 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 TCAIMQ8N3R3 496 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 IGSF8Q969P0 613 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 PKMYT1Q99640 499 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 ERVK13-1Q9NX77 482 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 TBC1D24Q9ULP9 559 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 TLR6Q9Y2C9 796 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 PCDHGA6Q9Y5G7 932 aa13.75□□□□□ -0.21
LDB3-209ENST00000623056 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.74□□□□□ -0.21
LDB3-209ENST00000623056 E9PQ18 207 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms