RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 POC1B-GALNT4F8VUJ3 575 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 PMPCBO75439 489 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 SHBGP04278 402 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 STSP08842 583 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 GPR89BP0CG08 455 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 EDN3P14138 238 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 IDSP22304 550 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 MAGEA3P43357 314 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 SESN2P58004 480 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 GABPB1Q06547 395 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 ABRQ12979 859 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 NCF4Q15080 339 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 SLC14A2Q15849 920 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 SPANXN3Q5MJ09 141 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 HP1BP3Q5SSJ5 553 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 ZNF449Q6P9G9 518 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 KLHL35Q6PF15 583 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 CYS1Q717R9 158 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 SYTL1Q8IYJ3 562 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 CLEC1AQ8NC01 280 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 GPR150Q8NGU9 434 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 FBF1Q8TES7 1133 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 TRIB3Q96RU7 358 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 LYSMD1Q96S90 227 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 CD180Q99467 661 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 TBL1YQ9BQ87 522 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 PCMTD2Q9NV79 361 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 PKD2L2Q9NZM6 624 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 TXNDC16Q9P2K2 825 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 KLF2Q9Y5W3 355 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 CCDC168Q8NDH2 2452 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 IQANK1A0A1B0GTG1 560 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 MASP2O00187 686 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 MTX2O75431 263 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 IPO13O94829 963 aaKnown RBP17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 PAMP19021 973 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 LONRF1Q17RB8 773 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 PTCHD3Q3KNS1 767 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 DCAF10Q5QP82 559 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 SPNS3Q6ZMD2 512 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 CAPN12Q6ZSI9 719 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 PPHLN1Q8NEY8 458 aaKnown RBP17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 EPS8L3Q8TE67 593 aaKnown RBP17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 ARL8AQ96BM9 186 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 TADA1Q96BN2 335 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 OXNAD1Q96HP4 312 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 FER1L6-AS2Q96M78 137 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 SPATA16Q9BXB7 569 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 LGALS13Q9UHV8 139 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 FAM169AQ9Y6X4 670 aa17.02■□□□□ 0.32
TRAPPC3-209ENST00000616395 RGSL1A5PLK6 1076 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 ZBTB11O95625 1053 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 KRT15P19012 456 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 SSTR1P30872 391 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 SLCO1A2P46721 670 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 SERPINB9P50453 376 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 FASTKD3Q14CZ7 662 aaKnown RBP17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 MSS51Q4VC12 460 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 TTMPQ5BVD1 217 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 TMTC4Q5T4D3 741 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 KCTD11Q693B1 232 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 KLHDC8BQ8IXV7 354 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 IPMKQ8NFU5 416 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 FAR1Q8WVX9 515 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 ITLN2Q8WWU7 325 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 SIGLEC10Q96LC7 697 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 TRAPPC9Q96Q05 1148 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 TRIM8Q9BZR9 551 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 SOHLH2Q9NX45 425 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 NSMCE4AQ9NXX6 385 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 SPO11Q9Y5K1 396 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 ACTL7BQ9Y614 415 aa17.01■□□□□ 0.31
TRAPPC3-209ENST00000616395 OR5K3A6NET4 321 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 ANKRD66B4E2M5 251 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 KLHL41O60662 606 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 AVILO75366 819 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 COX6B1P14854 86 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 CNTFP26441 200 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 MGAT1P26572 445 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 HALP42357 657 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 CHRNA4P43681 627 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 RPL26P61254 145 aaKnown RBP17■□□□□ 0.31
TRAPPC3-209ENST00000616395 MAGOHP61326 146 aaKnown RBP17■□□□□ 0.31
TRAPPC3-209ENST00000616395 PPP2R2AP63151 447 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 ILF2Q12905 390 aaKnown RBP17■□□□□ 0.31
TRAPPC3-209ENST00000616395 PLCL1Q15111 1095 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 PCID2Q5JVF3 399 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 KDELC1Q6UW63 502 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 LRRC6Q86X45 466 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 NXPE1Q8N323 547 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 OR52K1Q8NGK4 314 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 GLYATL1Q969I3 302 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 EID2BQ96D98 161 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 PPM1MQ96MI6 270 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 WDR77Q9BQA1 342 aaPredicted RBP17■□□□□ 0.31
TRAPPC3-209ENST00000616395 GORASP1Q9BQQ3 440 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 ACTR5Q9H9F9 607 aaPredicted RBP17■□□□□ 0.31
TRAPPC3-209ENST00000616395 HRASLS2Q9NWW9 162 aa17■□□□□ 0.31
TRAPPC3-209ENST00000616395 RPL26L1Q9UNX3 145 aaKnown RBP17■□□□□ 0.31
TRAPPC3-209ENST00000616395 FAM237BA0A1B0GVD1 139 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms