RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CATSPEREQ5SY80 951 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 FUT10Q6P4F1 479 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 UNC93AQ86WB7 457 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 REXO1L1PQ8IX06 675 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 POP5Q969H6 163 aaKnown RBP12.39□□□□□ -0.43
TCF4-248ENST00000616053 BTN2A3PQ96KV6 586 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 C11orf16Q9NQ32 467 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 GPR34Q9UPC5 381 aa12.39□□□□□ -0.43
TCF4-248ENST00000616053 IL32P24001 234 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 PON1P27169 355 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 ACSL1P33121 698 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 ZNF143P52747 638 aaPredicted RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 PTPRCAPQ14761 206 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 FIGNL1Q6PIW4 674 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 RHBDF2Q6PJF5 856 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 ZCCHC23Q6ZST2 131 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 TATDN2Q93075 761 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 NANOGQ9H9S0 305 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 ABCB8Q9NUT2 735 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 FARSAQ9Y285 508 aaKnown RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 MTHFRP42898 656 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 BRCC3P46736 316 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 ODF4Q2M2E3 257 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 GOT1L1Q8NHS2 421 aaPredicted RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 COPS5Q92905 334 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 NODALQ96S42 347 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 ACTR6Q9GZN1 396 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 NOL11Q9H8H0 719 aaKnown RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 ADGRE2Q9UHX3 823 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 RPL36Q9Y3U8 105 aaKnown RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 CPQQ9Y646 472 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 CLDN5O00501 218 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 MAN2B1O00754 1011 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 CDK2AP1O14519 115 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 CLPXO76031 633 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 FBLP22087 321 aaKnown RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 EDNRAP25101 427 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 C6orf183Q5T699 404 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 HAGHLQ6PII5 290 aaPredicted RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 GALNT5Q7Z7M9 940 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 CD300LFQ8TDQ1 290 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 KIAA1683Q9H0B3 1180 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 GRHPRQ9UBQ7 328 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 HSD11B2P80365 405 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 ZNF773Q6PK81 442 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 XKRXQ6PP77 449 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 MB21D2Q8IYB1 491 aaPredicted RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 SH3YL1Q96HL8 342 aaPredicted RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 RPL10LQ96L21 214 aaKnown RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 RAB21Q9UL25 225 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 C2CD2Q9Y426 696 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 DLDP09622 509 aaKnown RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 MYBPHQ13203 477 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 MPP7Q5T2T1 576 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 TLR10Q9BXR5 811 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 RAPGEF6Q8TEU7 1601 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 E9PI62 339 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 BLOC1S5-TXNDC5H3BN57 136 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 RNGTTO60942 597 aaKnown RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 ITGB1P05556 798 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 GNMTQ14749 295 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 EXOSC6Q5RKV6 272 aaKnown RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 SH3PXD2AQ5TCZ1 1133 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 ARCQ7LC44 396 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 OR5T1Q8NG75 326 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 CNOT9Q92600 299 aaKnown RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 NEDD4LQ96PU5 975 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 MATN2O00339 956 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 ZBTB11O95625 1053 aaPredicted RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 IFNA4P05014 189 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 FOSL1P15407 271 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 RPL10P27635 214 aaKnown RBP12.38□□□□□ -0.43
TCF4-248ENST00000616053 CCR10P46092 362 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 RAB10P61026 200 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 SH3D19Q5HYK7 790 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 PERM1Q5SV97 790 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 TMEM234Q8WY98 164 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 ISCUQ9H1K1 167 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 TREM1Q9NP99 234 aa12.38□□□□□ -0.43
TCF4-248ENST00000616053 IQSEC2Q5JU85 1478 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 GPR75-ASB3A0A0A6YYF3 556 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 A0A1B0GVM2 712 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 TCAF2A6NFQ2 919 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 TNFRSF11BO00300 401 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 SMAD9O15198 467 aaKnown RBP12.37□□□□□ -0.43
TCF4-248ENST00000616053 ALDOBP05062 364 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 IDO1P14902 403 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 CACNG1Q06432 222 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 MZT1Q08AG7 82 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 PRPF38BQ5VTL8 546 aaKnown RBP12.37□□□□□ -0.43
TCF4-248ENST00000616053 ZPBP2Q6X784 338 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 STOML3Q8TAV4 291 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 TM9SF2Q99805 663 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 MRPL57Q9BQC6 102 aaKnown RBP12.37□□□□□ -0.43
TCF4-248ENST00000616053 ZNF649Q9BS31 505 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 TM9SF3Q9HD45 589 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 ASB3Q9Y575 518 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 A0A0G2JN53 185 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 CCNE2O96020 404 aa12.37□□□□□ -0.43
TCF4-248ENST00000616053 MT-CO2P00403 227 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms