RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 APIPQ96GX9 242 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 CENPNQ96H22 339 aaPredicted RBP13.24□□□□□ -0.29
NEK3-205ENST00000610828 APOLD1Q96LR9 279 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 TRAPPC9Q96Q05 1148 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 FAM83CQ9BQN1 747 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 RNF103-CHMP3A0A140T963 221 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 EDDM13A0A1B0GTR0 161 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 H0Y858 1186 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 K7ESM1 405 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 ITGB7P26010 798 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 NRIP1P48552 1158 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 CCT8P50990 548 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 PLOD1Q02809 727 aaPredicted RBP13.24□□□□□ -0.29
NEK3-205ENST00000610828 AGTRAPQ6RW13 159 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 EPHX4Q8IUS5 362 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 RASGRP3Q8IV61 690 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 OR2T12Q8NG77 320 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 OR10A6Q8NH74 314 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 FGF13Q92913 245 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 SMARCD2Q92925 531 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 CMTM7Q96FZ5 175 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 COQ10AQ96MF6 247 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 RNF145Q96MT1 663 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 ZNF583Q96ND8 569 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 CENPKQ9BS16 269 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 FAM192AQ9GZU8 254 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 IKZF5Q9H5V7 419 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 SLC24A3Q9HC58 644 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 OAZ3Q9UMX2 235 aa13.24□□□□□ -0.29
NEK3-205ENST00000610828 MYOCOSA0A1B0GUC4 107 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 SLC5A10A0PJK1 596 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 HEPACAM2A8MVW5 462 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 E7EQ34 232 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 AREL1O15033 823 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 GMNNO75496 209 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 RECQL5O94762 991 aaPredicted RBP13.23□□□□□ -0.29
NEK3-205ENST00000610828 LRATO95237 230 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 SLC16A8O95907 504 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 PRPS2P11908 318 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 SDC1P18827 310 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 CD22P20273 847 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 CLDN8P56748 225 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 CYP4F3Q08477 520 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 GAB4Q2WGN9 574 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 LIN52Q52LA3 116 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 INTS11Q5TA45 600 aaKnown RBP13.23□□□□□ -0.29
NEK3-205ENST00000610828 LIPJQ5W064 366 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 NAIF1Q69YI7 327 aaPredicted RBP13.23□□□□□ -0.29
NEK3-205ENST00000610828 RAET1GQ6H3X3 334 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 GET4Q7L5D6 327 aaPredicted RBP13.23□□□□□ -0.29
NEK3-205ENST00000610828 TRAPPC5Q8IUR0 188 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 CHERPQ8IWX8 916 aaKnown RBP13.23□□□□□ -0.29
NEK3-205ENST00000610828 TBC1D21Q8IYX1 336 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 SLC22A15Q8IZD6 547 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 ATL1Q8WXF7 558 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 FIG4Q92562 907 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 GFM2Q969S9 779 aaKnown RBP13.23□□□□□ -0.29
NEK3-205ENST00000610828 CCDC138Q96M89 665 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 FOPNLQ96NB1 174 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 PRPF18Q99633 342 aaKnown RBP13.23□□□□□ -0.29
NEK3-205ENST00000610828 ZDHHC4Q9NPG8 344 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 SLC25A37Q9NYZ2 338 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 STOX2Q9P2F5 926 aaPredicted RBP13.23□□□□□ -0.29
NEK3-205ENST00000610828 SOD1P00441 154 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 ADRB3P13945 408 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 PRPH2P23942 346 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 MAPK1P28482 360 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 GPR1P46091 355 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 ELP6Q0PNE2 266 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 DDX39BQ13838 428 aaKnown RBP13.23□□□□□ -0.29
NEK3-205ENST00000610828 ELAVL3Q14576 367 aaKnown RBP13.23□□□□□ -0.29
NEK3-205ENST00000610828 ZNF234Q14588 700 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 PGS1Q32NB8 556 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 GTDC1Q4AE62 458 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 ANKRD46Q86W74 232 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 MSRB3Q8IXL7 192 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 TMIEQ8NEW7 156 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 NUS1Q96E22 293 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 EGLN2Q96KS0 407 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 MAGEB10Q96LZ2 347 aaPredicted RBP13.23□□□□□ -0.29
NEK3-205ENST00000610828 MTERF1Q99551 399 aaKnown RBP13.23□□□□□ -0.29
NEK3-205ENST00000610828 C9orf16Q9BUW7 83 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 OR2AG1Q9H205 316 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 PRM3Q9NNZ6 103 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 TMED5Q9Y3A6 229 aa13.23□□□□□ -0.29
NEK3-205ENST00000610828 H3BM21 787 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 GSTA4O15217 222 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 LZTS3O60299 673 aaPredicted RBP13.22□□□□□ -0.29
NEK3-205ENST00000610828 MMP20O60882 483 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 SMIM18P0DKX4 95 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 C6P13671 934 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 AMD1P17707 334 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 GGT1P19440 569 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 S100A3P33764 101 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 PHC1P78364 1004 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 DOC2AQ14183 400 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 CFAP206Q8IYR0 622 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 FAM9CQ8IZT9 166 aa13.22□□□□□ -0.29
NEK3-205ENST00000610828 PAPD5Q8NDF8 572 aaKnown RBP13.22□□□□□ -0.29
NEK3-205ENST00000610828 SH3GL1Q99961 368 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms