RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	TMEM120A	Q9BXJ8	343 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	DRC3	Q9H069	523 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PNPO	Q9NVS9	261 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	KCTD5	Q9NXV2	234 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	RNF215	Q9Y6U7	377 aa		13.2	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SYCE1L	A8MT33	242 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ERVH48-1	M5A8F1	160 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	NPHS1	O60500	1241 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CHRNG	P07510	517 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	JMJD7	P0C870	316 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	MYCLP1	P12525	358 aa	Predicted RBP	13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	GFAP	P14136	432 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	GLB1	P16278	677 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CCR10	P46092	362 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	GNPDA1	P46926	289 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	HNRNPH2	P55795	449 aa	Known RBP	13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	VAC14	Q08AM6	782 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TTLL9	Q3SXZ7	439 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	C14orf28	Q4W4Y0	310 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ACSBG2	Q5FVE4	666 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	DOK6	Q6PKX4	331 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PHYKPL	Q8IUZ5	450 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	WDR75	Q8IWA0	830 aa	Known RBP	13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	MYO1H	Q8N1T3	1032 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PDLIM5	Q96HC4	596 aa	Known RBP	13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	KCNK13	Q9HB14	408 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	LATS2	Q9NRM7	1088 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	LRIT1	Q9P2V4	623 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PISD	Q9UG56	409 aa		13.19	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CCDC189	A1A4V9	331 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	OR2AG2	A6NM03	316 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CCT8L1P	A6NM43	557 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TMX2-CTNND1	H3BSU7	103 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TNFRSF10C	O14798	259 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	NOBOX	O60393	691 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	AP2A2	O94973	939 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SOD1	P00441	154 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	HOXC4	P09017	264 aa	Predicted RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	MTHFD2	P13995	350 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	IMPDH1	P20839	514 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CCR7	P32248	378 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TRIM23	P36406	574 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	MAZ	P56270	477 aa	Known RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	NFKB2	Q00653	900 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	RHD	Q02161	417 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CFHR1	Q03591	330 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	DPT	Q07507	201 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CLN3	Q13286	438 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	EIF3I	Q13347	325 aa	Known RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PFKFB4	Q16877	469 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ARL13A	Q5H913	290 aa	Predicted RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TRPM8	Q7Z2W7	1104 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SPRED1	Q7Z699	444 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	GPSM1	Q86YR5	675 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ZNF781	Q8N8C0	355 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	LSM14A	Q8ND56	463 aa	Known RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CNDP1	Q96KN2	507 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ABCF3	Q9NUQ8	709 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	KCNK4	Q9NYG8	393 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	KLHL42	Q9P2K6	505 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	RAP2C	Q9Y3L5	183 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	LOXL2	Q9Y4K0	774 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	NCF1B	A6NI72	391 aa	Predicted RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	NCF1C	A8MVU1	366 aa	Predicted RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	QSOX1	O00391	747 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	HGS	O14964	777 aa	Predicted RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SGTA	O43765	313 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	KIAA0754	O94854	1291 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	FTH1	P02794	183 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CBSL	P0DN79	551 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	NCF1	P14598	390 aa	Predicted RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	MPST	P25325	297 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	AK4	P27144	223 aa	Predicted RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	AOAH	P28039	575 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SLC5A2	P31639	672 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CBS	P35520	551 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SERPINB5	P36952	375 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	MLLT3	P42568	568 aa	Predicted RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	AQP5	P55064	265 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	HERVK_113	P63132	956 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CDK3	Q00526	305 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	TMEM115	Q12893	351 aa	Predicted RBP	13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ILF3	Q12906	894 aa	Known RBP eCLIP	13.18	□□□□□ -0.3	3e-9	■■■■■ 31.4
PPHLN1-223	ENST00000610488	BIRC2	Q13490	618 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	AMZ1	Q400G9	498 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ZNF678	Q5SXM1	525 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PHF19	Q5T6S3	580 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	KIAA1614	Q5VZ46	1190 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	SLC30A9	Q6PML9	568 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	PCSK4	Q6UW60	755 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CCDC81	Q6ZN84	652 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	CCDC121	Q6ZUS5	278 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	FRA10AC1	Q70Z53	315 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ADAMTSL2	Q86TH1	951 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	NLRP8	Q86W28	1048 aa		13.18	□□□□□ -0.3
PPHLN1-223	ENST00000610488	ZNF843	Q8N446	348 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms