RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 RPA4Q13156 261 aa16.85■□□□□ 0.29
PPFIA3-207ENST00000602716 CLCA4Q14CN2 919 aa16.85■□□□□ 0.29
PPFIA3-207ENST00000602716 SLC9B1Q4ZJI4 515 aa16.85■□□□□ 0.29
PPFIA3-207ENST00000602716 MAMSTRQ6ZN01 415 aa16.85■□□□□ 0.29
PPFIA3-207ENST00000602716 DHDDSQ86SQ9 333 aa16.85■□□□□ 0.29
PPFIA3-207ENST00000602716 JADE3Q92613 823 aa16.85■□□□□ 0.29
PPFIA3-207ENST00000602716 IL17FQ96PD4 163 aa16.85■□□□□ 0.29
PPFIA3-207ENST00000602716 INSM2Q96T92 566 aaPredicted RBP16.85■□□□□ 0.29
PPFIA3-207ENST00000602716 ILKAPQ9H0C8 392 aaPredicted RBP16.85■□□□□ 0.29
PPFIA3-207ENST00000602716 MID1IP1Q9NPA3 183 aa16.85■□□□□ 0.29
PPFIA3-207ENST00000602716 STOX2Q9P2F5 926 aaPredicted RBP16.85■□□□□ 0.29
PPFIA3-207ENST00000602716 ASF1AQ9Y294 204 aa16.85■□□□□ 0.29
PPFIA3-207ENST00000602716 ZFC3H1O60293 1989 aaKnown RBP16.85■□□□□ 0.29
PPFIA3-207ENST00000602716 SPTY2D1-AS1A0A0U1RR47 76 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 OR7A17O14581 309 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 SORBS2O94875 1100 aaKnown RBP16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 SLC35G4P0C7Q5 338 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 COX4I1P13073 169 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 ITPKAP23677 461 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 SERPINB5P36952 375 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 SLC6A12P48065 614 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 LCP2Q13094 533 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 PTCHD3Q3KNS1 767 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 METTL21CQ5VZV1 264 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 SLC30A9Q6PML9 568 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 NRROSQ86YC3 692 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 DEFB107AQ8IZN7 70 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 C1orf216Q8TAB5 229 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 MCOLN3Q8TDD5 553 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 PYDC1Q8WXC3 89 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 TFGQ92734 400 aaPredicted RBP16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 HGH1Q9BTY7 390 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 CD244Q9BZW8 370 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 TM9SF3Q9HD45 589 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 TBC1D29Q9UFV1 150 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 TMCO1Q9UM00 188 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 PTGDR2Q9Y5Y4 395 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 ABCA7Q8IZY2 2146 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 PDZK1P1A8MUH7 402 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 TNFRSF10CO14798 259 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 HIST1H2AGP0C0S8 130 aaPredicted RBP16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 HIST1H2ADP20671 130 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 MAP4P27816 1152 aaKnown RBP16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 PEX19P40855 299 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 RPL14P50914 215 aaKnown RBP16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 AP1S2P56377 157 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 PLOD1Q02809 727 aaPredicted RBP16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 KLF10Q13118 480 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 PRKG2Q13237 762 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 GTF2H2Q13888 395 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 PDCD2Q16342 344 aaPredicted RBP16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 RBBP7Q16576 425 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 GTF2H2CQ6P1K8 395 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 RNF111Q6ZNA4 994 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 SFTPA2Q8IWL1 248 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 FBXL8Q96CD0 374 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 HIST1H2AHQ96KK5 128 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 FOPNLQ96NB1 174 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 HIST1H2AJQ99878 128 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 H2AFJQ9BTM1 129 aa16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 NOL11Q9H8H0 719 aaKnown RBP16.84■□□□□ 0.29
PPFIA3-207ENST00000602716 ZDBF2Q9HCK1 2354 aa16.83■□□□□ 0.29
PPFIA3-207ENST00000602716 LOC100653049A0A140TA62 436 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 E9PBE3 544 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 MATN2O00339 956 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 KLHL41O60662 606 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 GPR37L1O60883 481 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 KRT34O76011 436 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 IRX1P78414 480 aaPredicted RBP16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 TRAF3Q13114 568 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 CUL3Q13618 768 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 TCHHL1Q5QJ38 904 aaPredicted RBP16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 LETMD1Q6P1Q0 360 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 FBXW8Q8N3Y1 598 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 KLHDC7BQ96G42 594 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 C12orf66Q96MD2 445 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 RTKNQ9BST9 563 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 TRMOQ9BU70 441 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 TRIM54Q9BYV2 358 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 NUF2Q9BZD4 464 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 PCED1AQ9H1Q7 454 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 IMP3Q9NV31 184 aaKnown RBP16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 POMPQ9Y244 141 aa16.83■□□□□ 0.28
PPFIA3-207ENST00000602716 LAMTOR5O43504 91 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 HOXA6P31267 233 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 NUDT1P36639 197 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 ACTR1BP42025 376 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 ACTR1AP61163 376 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 CSTF1Q05048 431 aaKnown RBP16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 TBL3Q12788 808 aaKnown RBP16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 FASTKQ14296 549 aaKnown RBP16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 AGTRAPQ6RW13 159 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 UNC5DQ6UXZ4 953 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 SLC26A7Q8TE54 656 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 ZNF480Q8WV37 535 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 OR52B2Q96RD2 323 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 OPTCQ9UBM4 332 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 K7EPI3 171 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 PRAMEF4O60810 478 aa16.82■□□□□ 0.28
PPFIA3-207ENST00000602716 STK16O75716 305 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms