RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 CAMK1GQ96NX5 476 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 SGPP1Q9BX95 441 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 SAR1AQ9NR31 198 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 BTRCQ9Y297 605 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 DYRK1BQ9Y463 629 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 CACNA1IQ9P0X4 2223 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 KRT6AP02538 564 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 KRT6BP04259 564 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 WNT1P04628 370 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 LINC00032P0C843 101 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 ERGP11308 486 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 F3P13726 295 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 KRT6CP48668 564 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 CHIT1Q13231 466 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 TBCCQ15814 346 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 CYP2A13Q16696 494 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 GALNTL6Q49A17 601 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 ZNF542PQ5EBM4 170 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 THEMIS2Q5TEJ8 643 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 LIPJQ5W064 366 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 IL27RAQ6UWB1 636 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 LONP2Q86WA8 852 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 NRROSQ86YC3 692 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 C1orf210Q8IVY1 113 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 LRRC56Q8IYG6 542 aaPredicted RBP17.44■□□□□ 0.38
VRK3-225ENST00000601912 L3MBTL4Q8NA19 623 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 IL17FQ96PD4 163 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 OR4K3Q96R72 315 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 TUBB6Q9BUF5 446 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 TUBB1Q9H4B7 451 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 MRGBPQ9NV56 204 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 RIC8BQ9NVN3 520 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 SCHIP1Q9P0W5 487 aaPredicted RBP17.44■□□□□ 0.38
VRK3-225ENST00000601912 GON4LQ3T8J9 2241 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 TECTAO75443 2155 aa17.44■□□□□ 0.38
VRK3-225ENST00000601912 ABCA7Q8IZY2 2146 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 ATP6AP2A0A1C7CYW4 349 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 ULK1O75385 1050 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 ATP6AP2O75787 350 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 JUNDP17535 347 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 HNRNPH2P55795 449 aaKnown RBP17.43■□□□□ 0.38
VRK3-225ENST00000601912 PCDH1Q08174 1060 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 DMTNQ08495 405 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 FASTKQ14296 549 aaKnown RBP17.43■□□□□ 0.38
VRK3-225ENST00000601912 CPSF6Q16630 551 aaKnown RBP eCLIP17.43■□□□□ 0.38
VRK3-225ENST00000601912 XKR6Q5GH73 641 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 FAM91A1Q658Y4 838 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 SH3KBP1Q96B97 665 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 TUBGCP3Q96CW5 907 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 CXorf40BQ96DE9 158 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 C3orf30Q96M34 536 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 HAUS8Q9BT25 410 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 PCBD2Q9H0N5 130 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 ARMCX1Q9P291 453 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 APOBEC3BQ9UH17 382 aaKnown RBP17.43■□□□□ 0.38
VRK3-225ENST00000601912 KLF15Q9UIH9 416 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 SNX6Q9UNH7 406 aa17.43■□□□□ 0.38
VRK3-225ENST00000601912 FFAR3O14843 346 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 GPR42O15529 346 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 WFS1O76024 890 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 NPPBP16860 134 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 RAB28P51157 221 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 CSTF1Q05048 431 aaKnown RBP17.42■□□□□ 0.38
VRK3-225ENST00000601912 BNIP1Q12981 228 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 LACTB2Q53H82 288 aaPredicted RBP17.42■□□□□ 0.38
VRK3-225ENST00000601912 SUSD1Q6UWL2 747 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 RNF165Q6ZSG1 346 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 LARP4Q71RC2 724 aaKnown RBP eCLIP17.42■□□□□ 0.38
VRK3-225ENST00000601912 ARMCX6Q7L4S7 300 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 TAF8Q7Z7C8 310 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 C1orf216Q8TAB5 229 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 SMPDL3AQ92484 453 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 TCEAL2Q9H3H9 227 aaPredicted RBP17.42■□□□□ 0.38
VRK3-225ENST00000601912 KIR3DX1Q9H7L2 352 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 AKTIPQ9H8T0 292 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 TAAR2Q9P1P5 351 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 PTGDR2Q9Y5Y4 395 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 LRP4O75096 1905 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 A6NCN8 305 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 OR5K4A6NMS3 321 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 E7EQ34 232 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 UBDO15205 165 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 BCAT2O15382 392 aaPredicted RBP17.42■□□□□ 0.38
VRK3-225ENST00000601912 ATP5HO75947 161 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 EML2O95834 649 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 CSF2P04141 144 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 TDGF1P13385 188 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 SLC2A4P14672 509 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 JUPP14923 745 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 HNF4AP41235 474 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 AFF3P51826 1226 aaKnown RBP17.42■□□□□ 0.38
VRK3-225ENST00000601912 C21orf59P57076 290 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 UBAP2LQ14157 1087 aaKnown RBP17.42■□□□□ 0.38
VRK3-225ENST00000601912 KRT72Q14CN4 511 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 PRRT3Q5FWE3 981 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 TCHHL1Q5QJ38 904 aaPredicted RBP17.42■□□□□ 0.38
VRK3-225ENST00000601912 PRAMEF14Q5SWL7 426 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 PRAMEF13Q5VWM6 474 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 FAM219BQ5XKK7 198 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 LCTLQ6UWM7 567 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms