RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 ZFATQ9P243 1243 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 TRMT6Q9UJA5 497 aaKnown RBP15.62■□□□□ 0.09
LSM4-206ENST00000600289 ARHGEF33A8MVX0 844 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 GFYI3L273 518 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 MAP3K7O43318 606 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 CATP04040 527 aaKnown RBP15.61■□□□□ 0.09
LSM4-206ENST00000600289 BDKRB1P46663 353 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 PLTPP55058 493 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 ABHD18Q0P651 414 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 ARHGAP19Q14CB8 494 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 CYP2A13Q16696 494 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.61■□□□□ 0.09
LSM4-206ENST00000600289 MANEAQ5SRI9 462 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 RBM20Q5T481 1227 aaKnown RBP15.61■□□□□ 0.09
LSM4-206ENST00000600289 FBXO38Q6PIJ6 1188 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 CYHR1Q6ZMK1 362 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 CCDC81Q6ZN84 652 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 TIPARPQ7Z3E1 657 aaKnown RBP15.61■□□□□ 0.09
LSM4-206ENST00000600289 CACNA2D3Q8IZS8 1091 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 ESX1Q8N693 406 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 C19orf47Q8N9M1 422 aaKnown RBP15.61■□□□□ 0.09
LSM4-206ENST00000600289 KIF18AQ8NI77 898 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 PYROXD1Q8WU10 500 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 ASB11Q8WXH4 323 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 ZNF592Q92610 1267 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 TCTN2Q96GX1 697 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 MCMBPQ9BTE3 642 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 LRRC1Q9BTT6 524 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 ULBP3Q9BZM4 244 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 FANCEQ9HB96 536 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 SAYSD1Q9NPB0 183 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 SOHLH2Q9NX45 425 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 SLC17A6Q9P2U8 582 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 SLC39A10Q9ULF5 831 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 RUVBL2Q9Y230 463 aaKnown RBP15.61■□□□□ 0.09
LSM4-206ENST00000600289 PCDHB3Q9Y5E6 796 aa15.61■□□□□ 0.09
LSM4-206ENST00000600289 ISM1B1AKI9 464 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 EFSO43281 561 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 MT-ND3P03897 115 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 ZNF28P17035 718 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 FDXRP22570 491 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 HSD17B2P37059 387 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 CUL1Q13616 776 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 GPR19Q15760 415 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 CCSMST1Q4G0I0 132 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 FAM45BPQ6NSW5 357 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 CPNE9Q8IYJ1 553 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 OR9A1PQ8NGU1 263 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 FAM45AQ8TCE6 357 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 IL17FQ96PD4 163 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 NDNQ99608 321 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 ZDHHC18Q9NUE0 388 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 KLK4Q9Y5K2 254 aa15.6■□□□□ 0.09
LSM4-206ENST00000600289 CTAGE15A4D2H0 777 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 KIAA0754O94854 1291 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 TIAF1O95411 115 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 CTAGE8P0CG41 777 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 GP1BBP13224 206 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 PVRP15151 417 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 OAS2P29728 719 aaKnown RBP15.59■□□□□ 0.09
LSM4-206ENST00000600289 STAT5AP42229 794 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 GABRA4P48169 554 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 RGS4P49798 205 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 CDKN2DP55273 166 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 SP140Q13342 867 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 TRADDQ15628 312 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 GLE1Q53GS7 698 aaKnown RBP15.59■□□□□ 0.09
LSM4-206ENST00000600289 HECTD2Q5U5R9 776 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 PWWP2BQ6NUJ5 590 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 C6orf15Q6UXA7 325 aaPredicted RBP15.59■□□□□ 0.09
LSM4-206ENST00000600289 CDHR3Q6ZTQ4 885 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 CTAGE6Q86UF2 777 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 TRIM73Q86UV7 250 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 ZC3HC1Q86WB0 502 aaKnown RBP15.59■□□□□ 0.09
LSM4-206ENST00000600289 CTAGE4Q8IX94 777 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 PALM2Q8IXS6 379 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 IL22RA1Q8N6P7 574 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 LMNTD1Q8N9Z9 388 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 LRFN5Q96NI6 719 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 EFHD1Q9BUP0 239 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 ENAMQ9NRM1 1142 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 INTS7Q9NVH2 962 aaKnown RBP15.59■□□□□ 0.09
LSM4-206ENST00000600289 LNPEPQ9UIQ6 1025 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 VWA7Q9Y334 891 aa15.59■□□□□ 0.09
LSM4-206ENST00000600289 USP9YO00507 2555 aaPredicted RBP15.58■□□□□ 0.09
LSM4-206ENST00000600289 A0A1W2PPV9 198 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 ZNF839A8K0R7 811 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 H3BMH7 237 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 SLC16A5O15375 505 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 CPNE3O75131 537 aaKnown RBP15.58■□□□□ 0.08
LSM4-206ENST00000600289 C1QAP02745 245 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 C8GP07360 202 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 MCM3P25205 808 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 SSTR1P30872 391 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 GUCY2DQ02846 1103 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 ZIC1Q15915 447 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 STRA8Q7Z7C7 330 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 VASH2Q86V25 355 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 CDKL2Q92772 493 aa15.58■□□□□ 0.08
LSM4-206ENST00000600289 ELMO2Q96JJ3 720 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms