RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 C1orf189Q5VU69 101 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 FAM69BQ5VUD6 431 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 FCRL6Q6DN72 434 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 NEPROQ6NW34 567 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 MRPL14Q6P1L8 145 aaKnown RBP15.18■□□□□ 0.02
VRK3-221ENST00000600284 TTC27Q6P3X3 843 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 CAND1Q86VP6 1230 aaKnown RBP15.18■□□□□ 0.02
VRK3-221ENST00000600284 CILP2Q8IUL8 1156 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 C2orf73Q8N5S3 287 aaPredicted RBP15.18■□□□□ 0.02
VRK3-221ENST00000600284 PTERQ96BW5 349 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 FER1L6-AS2Q96M78 137 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 ZNF285Q96NJ3 590 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 XAB2Q9HCS7 855 aaKnown RBP15.18■□□□□ 0.02
VRK3-221ENST00000600284 INTS10Q9NVR2 710 aaKnown RBP15.18■□□□□ 0.02
VRK3-221ENST00000600284 SPATA7Q9P0W8 599 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 SAMD15Q9P1V8 674 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 PTRH2Q9Y3E5 179 aaKnown RBP15.18■□□□□ 0.02
VRK3-221ENST00000600284 NFS1Q9Y697 457 aa15.18■□□□□ 0.02
VRK3-221ENST00000600284 A0A1B0GX78 115 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 GOLGA8KD6RF30 607 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 GOLGA8TH3BQL2 631 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 DPM1O60762 260 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 ALBP02768 609 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 PKMP14618 531 aaKnown RBP15.17■□□□□ 0.02
VRK3-221ENST00000600284 CHRM3P20309 590 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 COILP38432 576 aaPredicted RBP15.17■□□□□ 0.02
VRK3-221ENST00000600284 GRIA3P42263 894 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 VPS41P49754 854 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 ATP1A4Q13733 1029 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 GRM7Q14831 915 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 NAA25Q14CX7 972 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 CYP2A13Q16696 494 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 CASC4Q6P4E1 433 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 CCDC137Q6PK04 289 aaKnown RBP15.17■□□□□ 0.02
VRK3-221ENST00000600284 MRGPREQ86SM8 312 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 ATCAYQ86WG3 371 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 FAM20CQ8IXL6 584 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 LMNTD2Q8IXW0 634 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 FDCSPQ8NFU4 85 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 FKBP10Q96AY3 582 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 SMAD5Q99717 465 aaKnown RBP15.17■□□□□ 0.02
VRK3-221ENST00000600284 GPR83Q9NYM4 423 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 IL1RAPL1Q9NZN1 696 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 C5AR2Q9P296 337 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 KLHL42Q9P2K6 505 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 CIDEBQ9UHD4 219 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 KLHL20Q9Y2M5 609 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 CRYL1Q9Y2S2 319 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 NEU2Q9Y3R4 380 aa15.17■□□□□ 0.02
VRK3-221ENST00000600284 FITM1A5D6W6 292 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 TTLL8A6PVC2 850 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 PEX12O00623 359 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 DSCR3O14972 297 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 ZNF185O15231 689 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 NIPSNAP2O75323 286 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 ALAS2P22557 587 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 OTX2P32243 289 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 HSD17B2P37059 387 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 MLLT10P55197 1068 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 DHX34Q14147 1143 aaKnown RBP15.16■□□□□ 0.02
VRK3-221ENST00000600284 ARHGAP19Q14CB8 494 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 FAM214AQ32MH5 1076 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 ANKRD20A4Q4UJ75 823 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 ANKRD22Q5VYY1 191 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 CNSTQ6PJW8 725 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 TTLL10Q6ZVT0 673 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 NEK10Q6ZWH5 1172 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 CENPUQ71F23 418 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 TAX1BP1Q86VP1 789 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 TTC29Q8NA56 475 aaPredicted RBP15.16■□□□□ 0.02
VRK3-221ENST00000600284 SELENOSQ9BQE4 189 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 SLC26A1Q9H2B4 701 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 PLAAQ9Y263 795 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 MED13Q9UHV7 2174 aa15.16■□□□□ 0.02
VRK3-221ENST00000600284 CLEC18AA5D8T8 446 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 E5RI56 91 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 PGRMC1O00264 195 aaKnown RBP15.15■□□□□ 0.02
VRK3-221ENST00000600284 PSIP1O75475 530 aaKnown RBP15.15■□□□□ 0.02
VRK3-221ENST00000600284 ERGP11308 486 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 MAGEA3P43357 314 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 BDKRB1P46663 353 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 TERF1P54274 439 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 SOX8P57073 446 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 THOC5Q13769 683 aaKnown RBP15.15■□□□□ 0.02
VRK3-221ENST00000600284 UBAP2LQ14157 1087 aaKnown RBP15.15■□□□□ 0.02
VRK3-221ENST00000600284 CCSMST1Q4G0I0 132 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 COLEC12Q5KU26 742 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 DCAF10Q5QP82 559 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 CLEC18BQ6UXF7 455 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 OVCH1Q7RTY7 1134 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 CLEC1AQ8NC01 280 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 CLEC18CQ8NCF0 446 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 OR2L3Q8NG85 312 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 OR2A1Q8NGT9 310 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 OR9A1PQ8NGU1 263 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 CALML6Q8TD86 181 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 ACTRT1Q8TDG2 376 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 GRK7Q8WTQ7 553 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 MS4A14Q96JA4 679 aa15.15■□□□□ 0.02
VRK3-221ENST00000600284 SERPINB12Q96P63 405 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms