RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 PIM1P11309 404 aaPredicted RBP5.84□□□□□ -1.47
VRK3-220ENST00000600259 CD9P21926 228 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 HTR1EP28566 365 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 CCR7P32248 378 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 NSG1P42857 185 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 ATP5OP48047 213 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 TNFSF10P50591 281 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 RAB28P51157 221 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 EFNA3P52797 238 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 KRTAP10-9P60411 292 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 ADORA2A-AS1P86434 159 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 SRSF11Q05519 484 aaKnown RBP5.84□□□□□ -1.47
VRK3-220ENST00000600259 CACNG1Q06432 222 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 KLC1Q07866 573 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 ITIH4Q14624 930 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 BRD3Q15059 726 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 CDSNQ15517 529 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 ZXDCQ2QGD7 858 aaPredicted RBP5.84□□□□□ -1.47
VRK3-220ENST00000600259 TUBB8Q3ZCM7 444 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 YOD1Q5VVQ6 348 aaPredicted RBP5.84□□□□□ -1.47
VRK3-220ENST00000600259 ITPRIPL1Q6GPH6 555 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 CAVIN1Q6NZI2 390 aaKnown RBP5.84□□□□□ -1.47
VRK3-220ENST00000600259 FBXO42Q6P3S6 717 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 ZNF449Q6P9G9 518 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 BNC2Q6ZN30 1099 aaPredicted RBP5.84□□□□□ -1.47
VRK3-220ENST00000600259 TAS2R42Q7RTR8 314 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 MRGPRGQ86SM5 289 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 HOOK3Q86VS8 718 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 SLC22A15Q8IZD6 547 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 OR4N4Q8N0Y3 316 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 ZNF808Q8N4W9 903 aaPredicted RBP5.84□□□□□ -1.47
VRK3-220ENST00000600259 C2orf73Q8N5S3 287 aaPredicted RBP5.84□□□□□ -1.47
VRK3-220ENST00000600259 ACBD4Q8NC06 268 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 CCDC110Q8TBZ0 833 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 STT3BQ8TCJ2 826 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 ADAMTS18Q8TE60 1221 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 DLG3Q92796 817 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 C8orf44Q96CB5 159 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 CCDC120Q96HB5 630 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 CNDP1Q96KN2 507 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 CCDC42Q96M95 316 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 SPATA13Q96N96 652 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 IL17FQ96PD4 163 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 TBL1YQ9BQ87 522 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 SOX17Q9H6I2 414 aaPredicted RBP5.84□□□□□ -1.47
VRK3-220ENST00000600259 EPS8L2Q9H6S3 715 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 SYNPO2LQ9H987 977 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 VPS37BQ9H9H4 285 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 LUC7LQ9NQ29 371 aaKnown RBP5.84□□□□□ -1.47
VRK3-220ENST00000600259 CUTCQ9NTM9 273 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 SMARCAL1Q9NZC9 954 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 IL1RAPL1Q9NZN1 696 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 FEZ2Q9UHY8 353 aaPredicted RBP5.84□□□□□ -1.47
VRK3-220ENST00000600259 TFR2Q9UP52 801 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 TDRKHQ9Y2W6 561 aaKnown RBP5.84□□□□□ -1.47
VRK3-220ENST00000600259 SNRNP200O75643 2136 aaKnown RBP5.83□□□□□ -1.48
VRK3-220ENST00000600259 LOC102723996A0A087X1L8 192 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 A0A1W2PPV9 198 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 CCDC162PA2VCL2 907 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 GOLGA6L22H0YM25 854 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 C19orf84I3L1E1 186 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 KCNN4O15554 427 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 NRP2O60462 931 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 SRPX2O60687 465 aaPredicted RBP5.83□□□□□ -1.48
VRK3-220ENST00000600259 SLCO2B1O94956 709 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 S1PR4O95977 384 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 SERPINA7P05543 415 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 CELA2AP08217 269 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 ZGLP1P0C6A0 271 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 PRR35P0CG20 571 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 COX6A1P12074 109 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 PTPN7P35236 360 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 PTGER4P35408 488 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 CA7P43166 264 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 KIR3DL1P43629 444 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 EIF3EP60228 445 aaKnown RBP5.83□□□□□ -1.48
VRK3-220ENST00000600259 COPS2P61201 443 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 SNRPNP63162 240 aaKnown RBP5.83□□□□□ -1.48
VRK3-220ENST00000600259 YBX1P67809 324 aaKnown RBP5.83□□□□□ -1.48
VRK3-220ENST00000600259 PLOD1Q02809 727 aaPredicted RBP5.83□□□□□ -1.48
VRK3-220ENST00000600259 TBX2Q13207 712 aaPredicted RBP5.83□□□□□ -1.48
VRK3-220ENST00000600259 PRPSAP1Q14558 356 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 GRM7Q14831 915 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 RBBP7Q16576 425 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 PARP6Q2NL67 630 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 PRTGQ2VWP7 1150 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 FAM214AQ32MH5 1076 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 ODF2Q5BJF6 829 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 DNAJC21Q5F1R6 531 aaKnown RBP5.83□□□□□ -1.48
VRK3-220ENST00000600259 VWA2Q5GFL6 755 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 ZC3H12BQ5HYM0 836 aaKnown RBP5.83□□□□□ -1.48
VRK3-220ENST00000600259 TCTE1Q5JU00 501 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 WASHC2DQ5SRD0 308 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 FRMPD2BQ6IN97 320 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 AADACL2Q6P093 401 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 FAM180AQ6UWF9 173 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 ZNF534Q76KX8 674 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 TMTC1Q8IUR5 882 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 ARHGEF39Q8N4T4 335 aa5.83□□□□□ -1.48
VRK3-220ENST00000600259 METTL27Q8N6F8 245 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms