RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 FGF14Q92915 247 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 EME1Q96AY2 570 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 FRG2BQ96QU4 278 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 CIB1Q99828 191 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 CLMPQ9H6B4 373 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 RPF2Q9H7B2 306 aaKnown RBP14.06□□□□□ -0.16
VRK3-217ENST00000599538 CCM2LQ9NUG4 571 aaPredicted RBP14.06□□□□□ -0.16
VRK3-217ENST00000599538 THG1LQ9NWX6 298 aaKnown RBP14.06□□□□□ -0.16
VRK3-217ENST00000599538 SLC25A37Q9NYZ2 338 aa14.06□□□□□ -0.16
VRK3-217ENST00000599538 TCRBV5S2A0A599 114 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 DHRS12A0PJE2 317 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 C7orf72A4D263 438 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 AQP12BA6NM10 295 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 QSOX1O00391 747 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 MAP3K13O43283 966 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 KAT7O95251 611 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 PGRP06401 933 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 ZNF8P17098 575 aaPredicted RBP14.05□□□□□ -0.16
VRK3-217ENST00000599538 SOX9P48436 509 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 EEFSECP57772 596 aaKnown RBP14.05□□□□□ -0.16
VRK3-217ENST00000599538 IRF8Q02556 426 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 MAD2L1Q13257 205 aaPredicted RBP14.05□□□□□ -0.16
VRK3-217ENST00000599538 PWP1Q13610 501 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 DOC2AQ14183 400 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 SMU1Q2TAY7 513 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 C6orf52Q5T4I8 152 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 CRTC3Q6UUV7 619 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 AQP12AQ8IXF9 295 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
VRK3-217ENST00000599538 GFM2Q969S9 779 aaKnown RBP14.05□□□□□ -0.16
VRK3-217ENST00000599538 PPWD1Q96BP3 646 aaKnown RBP14.05□□□□□ -0.16
VRK3-217ENST00000599538 BTBD9Q96Q07 612 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 MTERF1Q99551 399 aaKnown RBP14.05□□□□□ -0.16
VRK3-217ENST00000599538 ARMC1Q9NVT9 282 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 ASIC5Q9NY37 505 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 OBP2AQ9NY56 170 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 UBAP1Q9NZ09 502 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 THAP10Q9P2Z0 257 aaPredicted RBP14.05□□□□□ -0.16
VRK3-217ENST00000599538 CDH7Q9ULB5 785 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 TMEM98Q9Y2Y6 226 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 V9GYQ6 96 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 TRPM6Q9BX84 2022 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 DYTNA2CJ06 578 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 H3BM21 787 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 AKAP10O43572 662 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 SH3BGRLO75368 114 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 LRATO95237 230 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 STAMBPO95630 424 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 JUPP14923 745 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 SDC1P18827 310 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 DRD3P35462 400 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 RPS14P62263 151 aaKnown RBP14.05□□□□□ -0.16
VRK3-217ENST00000599538 CYP51A1Q16850 503 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 XKR6Q5GH73 641 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 TBCELQ5QJ74 424 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 OR52E8Q6IFG1 317 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 PARM1Q6UWI2 310 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 APOLD1Q96LR9 279 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 EBPLQ9BY08 206 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 CXorf56Q9H5V9 222 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 DYRK4Q9NR20 520 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 PPT2Q9UMR5 302 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 SH2B3Q9UQQ2 575 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 AP4B1Q9Y6B7 739 aa14.05□□□□□ -0.16
VRK3-217ENST00000599538 C1orf105O95561 183 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 NPPAP01160 153 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 MT-ND1P03886 318 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 CATP04040 527 aaKnown RBP14.04□□□□□ -0.16
VRK3-217ENST00000599538 LINGO3P0C6S8 592 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 AMD1P17707 334 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 HYAL1Q12794 435 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 DDX39BQ13838 428 aaKnown RBP14.04□□□□□ -0.16
VRK3-217ENST00000599538 NFE2L1Q14494 772 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 PDK3Q15120 406 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 MAPKAPK3Q16644 382 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 TMEM52BQ4KMG9 183 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 PIP5KL1Q5T9C9 394 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 WDR20Q8TBZ3 569 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 PPP1R16AQ96I34 528 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 CCDC138Q96M89 665 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 ZBTB18Q99592 522 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 NRTNQ99748 197 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 SERGEFQ9UGK8 458 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 FADS3Q9Y5Q0 445 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 NUMA1Q14980 2115 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 DENND4AQ7Z401 1863 aa14.04□□□□□ -0.16
VRK3-217ENST00000599538 GRXCR2A6NFK2 248 aa14.03□□□□□ -0.16
VRK3-217ENST00000599538 KCNH1O95259 989 aa14.03□□□□□ -0.16
VRK3-217ENST00000599538 ETHE1O95571 254 aa14.03□□□□□ -0.16
VRK3-217ENST00000599538 C1QCP02747 245 aa14.03□□□□□ -0.16
VRK3-217ENST00000599538 HTR1EP28566 365 aa14.03□□□□□ -0.16
VRK3-217ENST00000599538 TAS2R38P59533 333 aa14.03□□□□□ -0.16
VRK3-217ENST00000599538 DPTQ07507 201 aa14.03□□□□□ -0.16
VRK3-217ENST00000599538 BCL7AQ4VC05 210 aa14.03□□□□□ -0.16
VRK3-217ENST00000599538 FAM83HQ6ZRV2 1179 aaPredicted RBP14.03□□□□□ -0.16
VRK3-217ENST00000599538 ERMP1Q7Z2K6 904 aa14.03□□□□□ -0.16
VRK3-217ENST00000599538 C11orf96Q7Z7L8 435 aa14.03□□□□□ -0.16
VRK3-217ENST00000599538 ANKRD46Q86W74 232 aa14.03□□□□□ -0.16
VRK3-217ENST00000599538 C10orf111Q8N326 155 aa14.03□□□□□ -0.16
VRK3-217ENST00000599538 CPA6Q8N4T0 437 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms