RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 ETF1P62495 437 aaKnown RBP13.63□□□□□ -0.23
LIG1-218ENST00000599322 TSTA3Q13630 321 aaPredicted RBP13.63□□□□□ -0.23
LIG1-218ENST00000599322 ARHGAP19Q14CB8 494 aa13.63□□□□□ -0.23
LIG1-218ENST00000599322 ACSBG2Q5FVE4 666 aa13.63□□□□□ -0.23
LIG1-218ENST00000599322 SYVN1Q86TM6 617 aa13.63□□□□□ -0.23
LIG1-218ENST00000599322 TAX1BP1Q86VP1 789 aa13.63□□□□□ -0.23
LIG1-218ENST00000599322 OR9A1PQ8NGU1 263 aa13.63□□□□□ -0.23
LIG1-218ENST00000599322 SMPDL3AQ92484 453 aa13.63□□□□□ -0.23
LIG1-218ENST00000599322 CERS2Q96G23 380 aa13.63□□□□□ -0.23
LIG1-218ENST00000599322 IL17FQ96PD4 163 aa13.63□□□□□ -0.23
LIG1-218ENST00000599322 TRIM56Q9BRZ2 755 aaKnown RBP13.63□□□□□ -0.23
LIG1-218ENST00000599322 CIDEBQ9UHD4 219 aa13.63□□□□□ -0.23
LIG1-218ENST00000599322 SNX7Q9UNH6 387 aa13.63□□□□□ -0.23
LIG1-218ENST00000599322 DHRS7Q9Y394 339 aa13.63□□□□□ -0.23
LIG1-218ENST00000599322 NFS1Q9Y697 457 aa13.63□□□□□ -0.23
LIG1-218ENST00000599322 MYO18BQ8IUG5 2567 aa13.63□□□□□ -0.23
LIG1-218ENST00000599322 BSNQ9UPA5 3926 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 TARM1B6A8C7 271 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 ZSCAN9O15535 394 aaPredicted RBP13.62□□□□□ -0.23
LIG1-218ENST00000599322 HAUS5O94927 633 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 MATN4O95460 622 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 RAB40ALP0C0E4 278 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 FAM87AP0C7U9 286 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 ERVK-10P10266 1014 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 MAGP20916 626 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 ELK3P41970 407 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 CKAP4Q07065 602 aaKnown RBP13.62□□□□□ -0.23
LIG1-218ENST00000599322 ILF2Q12905 390 aaKnown RBP13.62□□□□□ -0.23
LIG1-218ENST00000599322 TCTE1Q5JU00 501 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 HIBCHQ6NVY1 386 aaPredicted RBP13.62□□□□□ -0.23
LIG1-218ENST00000599322 FAM199XQ6PEV8 388 aaPredicted RBP13.62□□□□□ -0.23
LIG1-218ENST00000599322 FIGLAQ6QHK4 219 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 DSELQ8IZU8 1212 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 MYO1HQ8N1T3 1032 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 TTC29Q8NA56 475 aaPredicted RBP13.62□□□□□ -0.23
LIG1-218ENST00000599322 C2CD4AQ8NCU7 369 aaPredicted RBP13.62□□□□□ -0.23
LIG1-218ENST00000599322 HMGCLL1Q8TB92 370 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 THAP4Q8WY91 577 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 GPR21Q99679 349 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 NRTNQ99748 197 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 TRIM51Q9BSJ1 452 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 AARSD1Q9BTE6 412 aaKnown RBP13.62□□□□□ -0.23
LIG1-218ENST00000599322 CHST8Q9H2A9 424 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 ACTL8Q9H568 366 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 GEMIN8Q9NWZ8 242 aaKnown RBP13.62□□□□□ -0.23
LIG1-218ENST00000599322 NDOR1Q9UHB4 597 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 TUBD1Q9UJT1 453 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 CORO1CQ9ULV4 474 aaPredicted RBP13.62□□□□□ -0.23
LIG1-218ENST00000599322 G3BP2Q9UN86 482 aaKnown RBP13.62□□□□□ -0.23
LIG1-218ENST00000599322 CHMP2BQ9UQN3 213 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 UTP11Q9Y3A2 253 aaKnown RBP13.62□□□□□ -0.23
LIG1-218ENST00000599322 BOD1L1Q8NFC6 3051 aa13.62□□□□□ -0.23
LIG1-218ENST00000599322 B8ZZF3 427 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 MKRN2OSH3BPM6 223 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 PYCARD-AS1I3L0S3 204 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 PSIP1O75475 530 aaKnown RBP13.61□□□□□ -0.23
LIG1-218ENST00000599322 SEC31AO94979 1220 aaKnown RBP13.61□□□□□ -0.23
LIG1-218ENST00000599322 HIST1H2AGP0C0S8 130 aaPredicted RBP13.61□□□□□ -0.23
LIG1-218ENST00000599322 TPBGLP0DKB5 382 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 HIST1H2ADP20671 130 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 CLCN7P51798 805 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 POLE2P56282 527 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 MPP1Q00013 466 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 PDIA2Q13087 525 aaKnown RBP13.61□□□□□ -0.23
LIG1-218ENST00000599322 GPS2Q13227 327 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 KCNAB2Q13303 367 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 PDAP1Q13442 181 aaKnown RBP13.61□□□□□ -0.23
LIG1-218ENST00000599322 DEFB110Q30KQ9 67 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 FAM214AQ32MH5 1076 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 LINC00303Q3SY05 128 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 ZNF789Q5FWF6 425 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 THEMIS2Q5TEJ8 643 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 YOD1Q5VVQ6 348 aaPredicted RBP13.61□□□□□ -0.23
LIG1-218ENST00000599322 SYT10Q6XYQ8 523 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 MCATQ8IVS2 390 aaKnown RBP13.61□□□□□ -0.23
LIG1-218ENST00000599322 SYTL1Q8IYJ3 562 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 LMNTD1Q8N9Z9 388 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 LINC01555Q8NAE3 123 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 SPATA4Q8NEY3 305 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 PROKR1Q8TCW9 393 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 MCOLN3Q8TDD5 553 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 HIST1H2AHQ96KK5 128 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 HIST1H2AJQ99878 128 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 H2AFJQ9BTM1 129 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 DHRS4Q9BTZ2 278 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 NLNQ9BYT8 704 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 TRIM54Q9BYV2 358 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 RAB17Q9H0T7 212 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 FAM60AQ9NP50 221 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 NSMCE4AQ9NXX6 385 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 EURLQ9NYK6 297 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 ZFATQ9P243 1243 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 TXNDC16Q9P2K2 825 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 RUVBL2Q9Y230 463 aaKnown RBP13.61□□□□□ -0.23
LIG1-218ENST00000599322 MAN2B2Q9Y2E5 1009 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 SNX24Q9Y343 169 aa13.61□□□□□ -0.23
LIG1-218ENST00000599322 MRPS18BQ9Y676 258 aaKnown RBP13.61□□□□□ -0.23
LIG1-218ENST00000599322 SRPX2O60687 465 aaPredicted RBP13.6□□□□□ -0.23
LIG1-218ENST00000599322 ALAS2P22557 587 aa13.6□□□□□ -0.23
LIG1-218ENST00000599322 F8A1P23610 371 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms