RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	FIGLA	Q6QHK4	219 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	IGFL3	Q6UXB1	125 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	UNC5D	Q6UXZ4	953 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	OVCH1	Q7RTY7	1134 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	ZADH2	Q8N4Q0	377 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	OR2L8	Q8NGY9	312 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	ASZ1	Q8WWH4	475 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	DLG3	Q92796	817 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	FKBP10	Q96AY3	582 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	SPSB2	Q99619	263 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	MESP1	Q9BRJ9	268 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	CARD6	Q9BX69	1037 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	TSSK1B	Q9BXA7	367 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	SOX17	Q9H6I2	414 aa	Predicted RBP	10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	SLC6A20	Q9NP91	592 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	ATP13A2	Q9NQ11	1180 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	CHRAC1	Q9NRG0	131 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	CATSPERZ	Q9NTU4	200 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	TSR3	Q9UJK0	312 aa	Known RBP	10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	SLC39A10	Q9ULF5	831 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	RIMKLB	Q9ULI2	386 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	ZNF148	Q9UQR1	794 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	PCDHGA10	Q9Y5H3	936 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	NFS1	Q9Y697	457 aa		10.1	□□□□□ -0.79
LSM4-205	ENST00000597776	CRYBG3	Q68DQ2	2970 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	ANKUB1	A6NFN9	424 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	SOCS6	O14544	535 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	PRMT5	O14744	637 aa	Predicted RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	RASGRF2	O14827	1237 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	DSCR3	O14972	297 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	CTSV	O60911	334 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	IPO13	O94829	963 aa	Known RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	SLCO2B1	O94956	709 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	MED26	O95402	600 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	DDAH2	O95865	285 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	S1PR4	O95977	384 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	LDLR	P01130	860 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	RPN2	P04844	631 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	MMP11	P24347	488 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	STIP1	P31948	543 aa	Known RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	OR1D4	P47884	311 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	GLRB	P48167	497 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	ARSF	P54793	590 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	SOX8	P57073	446 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	SESN2	P58004	480 aa	Predicted RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	VSX2	P58304	361 aa	Predicted RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	AIMP2	Q13155	320 aa	Known RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	TMED2	Q15363	201 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	NKG7	Q16617	165 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	KCTD19	Q17RG1	926 aa	Predicted RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	AARS2	Q5JTZ9	985 aa	Known RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	SEL1L2	Q5TEA6	688 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	PRAMEF13	Q5VWM6	474 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	ZNF787	Q6DD87	383 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	PTRHD1	Q6GMV3	140 aa	Known RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	KIRREL2	Q6UWL6	708 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776		Q6ZS92	163 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	SLC13A5	Q86YT5	568 aa	Predicted RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	PPHLN1	Q8NEY8	458 aa	Known RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	SKA2	Q8WVK7	121 aa	Predicted RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	TM9SF4	Q92544	642 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	SLC22A18	Q96BI1	424 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	SELENOS	Q9BQE4	189 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	CUTC	Q9NTM9	273 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	INTS7	Q9NVH2	962 aa	Known RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	STOX2	Q9P2F5	926 aa	Predicted RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	HS3ST3B1	Q9Y662	390 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	COPG1	Q9Y678	874 aa	Known RBP	10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	MAU2	Q9Y6X3	613 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	PCM1	Q15154	2024 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	DOPEY1	Q5JWR5	2465 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	CELSR2	Q9HCU4	2923 aa		10.09	□□□□□ -0.79
LSM4-205	ENST00000597776	NUP210L	Q5VU65	1888 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	WIPF3	A6NGB9	483 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	CD3EAP	O15446	510 aa	Known RBP	10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	PRICKLE3	O43900	615 aa	Predicted RBP	10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	C1orf105	O95561	183 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	ONECUT2	O95948	504 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	RPL22	P35268	128 aa	Known RBP	10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	PPARG	P37231	505 aa	Predicted RBP	10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	TTPA	P49638	278 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	YBX1	P67809	324 aa	Known RBP	10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	GRM7	Q14831	915 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	ZC3H12B	Q5HYM0	836 aa	Known RBP	10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	FRMPD2B	Q6IN97	320 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	CNST	Q6PJW8	725 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	NLRP9	Q7RTR0	991 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	MAMDC2	Q7Z304	686 aa	Predicted RBP	10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	PARP9	Q8IXQ6	854 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	PRSS58	Q8IYP2	241 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	CCDC89	Q8N998	374 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	GSDMB	Q8TAX9	411 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	DENND1A	Q8TEH3	1009 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	UBE2Q2	Q8WVN8	375 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	FAM136A	Q96C01	138 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	ZNF285	Q96NJ3	590 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	MIPEP	Q99797	713 aa		10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	WDR77	Q9BQA1	342 aa	Predicted RBP	10.08	□□□□□ -0.8
LSM4-205	ENST00000597776	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.08	□□□□□ -0.8

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