RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 SELENOSQ9BQE4 189 aa18.78■□□□□ 0.6
PRKCSH-216ENST00000592445 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.78■□□□□ 0.6
PRKCSH-216ENST00000592445 ZNHIT6Q9NWK9 470 aaKnown RBP18.78■□□□□ 0.6
PRKCSH-216ENST00000592445 SEC14L3Q9UDX4 400 aa18.78■□□□□ 0.6
PRKCSH-216ENST00000592445 FEZ2Q9UHY8 353 aaPredicted RBP18.78■□□□□ 0.6
PRKCSH-216ENST00000592445 PRSS21Q9Y6M0 314 aa18.78■□□□□ 0.6
PRKCSH-216ENST00000592445 NF1P21359 2839 aa18.78■□□□□ 0.6
PRKCSH-216ENST00000592445 PKDREJQ9NTG1 2253 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 BHMG1C9JSJ3 638 aaPredicted RBP18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 QSOX1O00391 747 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 PKLRP30613 574 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 NSG1P42857 185 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 CA7P43166 264 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 CASP6P55212 293 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 RBPJQ06330 500 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 KLC1Q07866 573 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 SPARCL1Q14515 664 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.77■□□□□ 0.69e-7■□□□□ 10.3
PRKCSH-216ENST00000592445 FAM214AQ32MH5 1076 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 ANKRD20A2Q5SQ80 823 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 ANKRD20A1Q5TYW2 823 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 ANKRD20A3Q5VUR7 823 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 LUZP1Q86V48 1076 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 TAX1BP1Q86VP1 789 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 PIANPQ8IYJ0 282 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 RCOR2Q8IZ40 523 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 BRIX1Q8TDN6 353 aaKnown RBP18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 SLC22A18Q96BI1 424 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 MIEF2Q96C03 454 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 HEMGNQ9BXL5 484 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 LUC7LQ9NQ29 371 aaKnown RBP18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 SPTLC3Q9NUV7 552 aa18.77■□□□□ 0.6
PRKCSH-216ENST00000592445 NSG1A0A0A6YYJ2 146 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 STK10O94804 968 aaKnown RBP18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 F10P00742 488 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 CRYABP02511 175 aaKnown RBP18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 CSE1LP55060 971 aaKnown RBP18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 PLOD1Q02809 727 aaPredicted RBP18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 DENND5AQ6IQ26 1287 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 XKRXQ6PP77 449 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 KATNAL2Q8IYT4 538 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 SIRT6Q8N6T7 355 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 OR8K1Q8NGG5 319 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 STT3BQ8TCJ2 826 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 HAS2Q92819 552 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 CCDC42Q96M95 316 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 ALS2CR12Q96Q35 445 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 ZNF304Q9HCX3 659 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 NLE1Q9NVX2 485 aaPredicted RBP18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 IFNKQ9P0W0 207 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 ABI3Q9P2A4 366 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 C3orf18Q9UK00 162 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 MRPS2Q9Y399 296 aaKnown RBP18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 SNRNP200O75643 2136 aaKnown RBP18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 ITPR3Q14573 2671 aa18.76■□□□□ 0.59
PRKCSH-216ENST00000592445 SLC5A10A0PJK1 596 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 MACROD2A1Z1Q3 448 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 H7C0S8 307 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 RASAL1O95294 804 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 ZGLP1P0C6A0 271 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 PRR35P0CG20 571 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 FDXRP22570 491 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 MST1P26927 711 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 SSTR2P30874 369 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 SOX11P35716 441 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 SRSF11Q05519 484 aaKnown RBP18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 SF1Q15637 639 aaKnown RBP18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 FIGLAQ6QHK4 219 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 NDUFAF7Q7L592 441 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 DTWD1Q8N5C7 304 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 LMNTD1Q8N9Z9 388 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 LINC01555Q8NAE3 123 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 CDKN2AIPNLQ96HQ2 116 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 PPP1R2P1Q96PQ5 205 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 IMPACTQ9P2X3 320 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 ZNF282Q9UDV7 671 aaPredicted RBP18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 CIDEBQ9UHD4 219 aa18.75■□□□□ 0.59
PRKCSH-216ENST00000592445 HYKKA2RU49 373 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 APOC4-APOC2K7ER74 178 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 KCNN4O15554 427 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 WFS1O76024 890 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 S1PR4O95977 384 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 APOC2P02655 101 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 OR56A5P0C7T3 313 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 ESRRAP11474 423 aaPredicted RBP18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 TPH1P17752 444 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 CD9P21926 228 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 VSX2P58304 361 aaPredicted RBP18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 ITIH4Q14624 930 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 DNAJC21Q5F1R6 531 aaKnown RBP18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 WASHC2DQ5SRD0 308 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 ATG9BQ674R7 924 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 CNSTQ6PJW8 725 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 ARHGEF18Q6ZSZ5 1173 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 BBS12Q6ZW61 710 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 CDKL3Q8IVW4 592 aaPredicted RBP18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 ZNF295-AS1Q8N0V1 137 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 DNAJB8Q8NHS0 232 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 CFAP61Q8NHU2 1237 aa18.74■□□□□ 0.59
PRKCSH-216ENST00000592445 SUN3Q8TAQ9 357 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms