RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CNTN4Q8IWV2 1026 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 CTAGE3PQ8IX95 158 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 FAM20CQ8IXL6 584 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 SYTL1Q8IYJ3 562 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 FAM45AQ8TCE6 357 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 CD200R1Q8TD46 325 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 SMPDL3AQ92484 453 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 MR1Q95460 341 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 ZNF501Q96CX3 271 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-227ENST00000591849 VPS39Q96JC1 886 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 HIST1H2AHQ96KK5 128 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 PKP4Q99569 1192 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 MIPEPQ99797 713 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 HIST1H2AJQ99878 128 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 ARHGAP9Q9BRR9 750 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 H2AFJQ9BTM1 129 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 TRIM54Q9BYV2 358 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 PITPNM3Q9BZ71 974 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 GRHL1Q9NZI5 618 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 SLC17A6Q9P2U8 582 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 MTRF1LQ9UGC7 380 aaKnown RBP9.72□□□□□ -0.85
BRCA1-227ENST00000591849 KLHL20Q9Y2M5 609 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 PCDHB3Q9Y5E6 796 aa9.72□□□□□ -0.85
BRCA1-227ENST00000591849 AHCTF1Q8WYP5 2266 aa9.71□□□□□ -0.85
BRCA1-227ENST00000591849 LOC101059948A0A1B0GTJ6 334 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 ESYT3A0FGR9 886 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 ZNF891A8MT65 544 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-227ENST00000591849 ARHGEF33A8MVX0 844 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 EIF3FO00303 357 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-227ENST00000591849 PSIP1O75475 530 aaKnown RBP9.71□□□□□ -0.86
BRCA1-227ENST00000591849 OR2B3O76000 313 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 CCNDBP1O95273 360 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 FKBP9O95302 570 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 DLGAP3O95886 979 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 C8GP07360 202 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 HBQ1P09105 142 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 ATXN8OSP0DMR3 200 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 LIFP15018 202 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 TCN2P20062 427 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 MAGP20916 626 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 GABRB3P28472 473 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 SSTR1P30872 391 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 DLSTP36957 453 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 STAT5AP42229 794 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 MAGEA4P43358 317 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 PNLIPRP1P54315 467 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 CDKN2DP55273 166 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 GRB7Q14451 532 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 ARHGAP19Q14CB8 494 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 NAA25Q14CX7 972 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 ZC3H12BQ5HYM0 836 aaKnown RBP9.71□□□□□ -0.86
BRCA1-227ENST00000591849 RBM20Q5T481 1227 aaKnown RBP9.71□□□□□ -0.86
BRCA1-227ENST00000591849 C16orf46Q6P387 395 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 CYHR1Q6ZMK1 362 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 CDHR3Q6ZTQ4 885 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 PIWIL4Q7Z3Z4 852 aaKnown RBP9.71□□□□□ -0.86
BRCA1-227ENST00000591849 GALNT7Q86SF2 657 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 SLC26A11Q86WA9 606 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 MMGT1Q8N4V1 131 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 CEP112Q8N8E3 955 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 LINC01555Q8NAE3 123 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 OR1L3Q8NH93 324 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 GIMAP7Q8NHV1 300 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 FBXO25Q8TCJ0 367 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 EEF1AKMT1Q8WVE0 214 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 ASB11Q8WXH4 323 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 IFT81Q8WYA0 676 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 ALKBH8Q96BT7 664 aaKnown RBP9.71□□□□□ -0.86
BRCA1-227ENST00000591849 LINGO1Q96FE5 620 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 UBL7Q96S82 380 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-227ENST00000591849 WDR83Q9BRX9 315 aaKnown RBP9.71□□□□□ -0.86
BRCA1-227ENST00000591849 ACAT2Q9BWD1 397 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 SPRY4Q9C004 299 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 ACTR5Q9H9F9 607 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-227ENST00000591849 UTP6Q9NYH9 597 aaKnown RBP9.71□□□□□ -0.86
BRCA1-227ENST00000591849 KCND3Q9UK17 655 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 PLCL2Q9UPR0 1127 aa9.71□□□□□ -0.86
BRCA1-227ENST00000591849 COL27A1Q8IZC6 1860 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-227ENST00000591849 FAM95CA0A1B0GW59 222 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 KRT87PA6NCN2 255 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 TK2O00142 265 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 TP73O15350 636 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 TIAF1O95411 115 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 AGXTP21549 392 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 PEBP1P30086 187 aaKnown RBP9.7□□□□□ -0.86
BRCA1-227ENST00000591849 STX2P32856 288 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 GRIA3P42263 894 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 RPS15P62841 145 aaKnown RBP9.7□□□□□ -0.86
BRCA1-227ENST00000591849 FASTKQ14296 549 aaKnown RBP9.7□□□□□ -0.86
BRCA1-227ENST00000591849 CYP2A13Q16696 494 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 DEFB110Q30KQ9 67 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 GLE1Q53GS7 698 aaKnown RBP9.7□□□□□ -0.86
BRCA1-227ENST00000591849 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.7□□□□□ -0.86
BRCA1-227ENST00000591849 KIAA1614Q5VZ46 1190 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 SUSD1Q6UWL2 747 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 ADCK2Q7Z695 626 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 MCATQ8IVS2 390 aaKnown RBP9.7□□□□□ -0.86
BRCA1-227ENST00000591849 NKAPQ8N5F7 415 aaKnown RBP9.7□□□□□ -0.86
BRCA1-227ENST00000591849 PPM1NQ8N819 430 aa9.7□□□□□ -0.86
BRCA1-227ENST00000591849 ZUFSPQ96AP4 578 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms