RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 KLHL22Q53GT1 634 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 MS4A13Q5J8X5 152 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 GALNT15Q8N3T1 639 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 LMX1AQ8TE12 382 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC35F5Q8WV83 523 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC13A3Q8WWT9 602 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 WDR6Q9NNW5 1121 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 FBXW2Q9UKT8 454 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 PHF24Q9UPV7 400 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 S100A6P06703 90 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 CD247P20963 164 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 DNAJB1P25685 340 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 CBX5P45973 191 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 CCR10P46092 362 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 HEPACAMQ14CZ8 416 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF311Q5JNZ3 666 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 CLEC6AQ6EIG7 209 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 CPNE9Q8IYJ1 553 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 DENND1AQ8TEH3 1009 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC9A6Q92581 669 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 EXOSC8Q96B26 276 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 TRIM2Q9C040 744 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 TFB2MQ9H5Q4 396 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 TAS2R1Q9NYW7 299 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF282Q9UDV7 671 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 MYADML2A6NDP7 307 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 PEX12O00623 359 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 PRODHO43272 600 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 MLLT3P42568 568 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC13A2Q13183 592 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 ZDHHC21Q8IVQ6 265 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 FSTL5Q8N475 847 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 NSMCE3Q96MG7 304 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 CYP2S1Q96SQ9 504 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 GPATCH1Q9BRR8 931 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 ALKBH4Q9NXW9 302 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 XKRYO14609 159 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 SAGP10523 405 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 ANXA8P13928 327 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 CPN2P22792 545 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 AQP1P29972 269 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 INCA1Q0VD86 236 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 FRMD7Q6ZUT3 714 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 DOT1LQ8TEK3 1739 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 XAGE5Q8WWM1 108 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 TP53INP1Q96A56 240 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 GPR62Q9BZJ7 368 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 MYH2Q9UKX2 1941 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 FAM25EA8MYX2 175 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 PIP5K1BO14986 540 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 CA3P07451 260 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 NMBRP28336 390 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 SEMG2Q02383 582 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 PITRM1Q5JRX3 1037 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.02□□□□□ -0.321e-7■■■■■ 34.5
SMARCA4-216ENST00000591545 ADNP2Q6IQ32 1131 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC9B2Q86UD5 537 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 RANBP3LQ86VV4 465 aaPredicted RBP13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 SMG9Q9H0W8 520 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 TPK1Q9H3S4 243 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 SPHK2Q9NRA0 654 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 THUMPD1Q9NXG2 353 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 HEPACAM2A8MVW5 462 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 SEPHS1P49903 392 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 TPRG1Q6ZUI0 275 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 LIX1Q8N485 282 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 HCAR2Q8TDS4 363 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 DNASE1L2Q92874 299 aa13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 KIAA1143Q96AT1 154 aaPredicted RBP13.02□□□□□ -0.32
SMARCA4-216ENST00000591545 MMP20O60882 483 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 PRKCGP05129 697 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 GSTT2BP0CG30 244 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 C1QTNF8P60827 252 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 PRR5P85299 388 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 PITPNAQ00169 270 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 SLC10A7Q0GE19 358 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 CBX3Q13185 183 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 PAOXQ6QHF9 649 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 RASSF6Q6ZTQ3 369 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 STX12Q86Y82 276 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 NATD1Q8N6N6 113 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 DCAKDQ8WVC6 231 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 LRRC3Q9BY71 257 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 ADAMTS10Q9H324 1103 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 ANKRA2Q9H9E1 313 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 IKZF2Q9UKS7 526 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 FAM149AA5PLN7 773 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 TEX46H3BTG2 121 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 CDH1P12830 882 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 IL12BP29460 328 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 HOXC12P31275 282 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 RPS14P62263 151 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 MVKQ03426 396 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 EML3Q32P44 896 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 HFE2Q6ZVN8 426 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 SNX33Q8WV41 574 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 CLCC1Q96S66 551 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 FAM83CQ9BQN1 747 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 TAPBPLQ9BX59 468 aa13.02□□□□□ -0.33
SMARCA4-216ENST00000591545 TTYH1Q9H313 450 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms