RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SNX6Q9UNH7 406 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 GPR34Q9UPC5 381 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 EIF3LQ9Y262 564 aaKnown RBP8.52□□□□□ -1.05
SMAD4-206ENST00000588860 PRKAB1Q9Y478 270 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 PIAS3Q9Y6X2 628 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 ZNF318Q5VUA4 2279 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 PLXND1Q9Y4D7 1925 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 C5orf42Q9H799 3197 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 HEATR5BQ9P2D3 2071 aa8.52□□□□□ -1.05
SMAD4-206ENST00000588860 SNRNP200O75643 2136 aaKnown RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 C17orf113A0A1B0GUU1 675 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 A0A1W2PQU0 124 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 FAM234BA2RU67 622 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 MGAT4DA6NG13 374 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 CCDC154A6NI56 674 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 E7EQ34 232 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 C1orf105O95561 183 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 BAG2O95816 211 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 G6PDP11413 515 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 JUPP14923 745 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 ANPEPP15144 967 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 GNAZP19086 355 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 IMPA1P29218 277 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 RPS21P63220 83 aaKnown RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 HMGCS1Q01581 520 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 PLOD1Q02809 727 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 SLC34A1Q06495 639 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 GRSF1Q12849 480 aaKnown RBP eCLIP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 CHIT1Q13231 466 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 MAD2L1Q13257 205 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 SGCGQ13326 291 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 TSTA3Q13630 321 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 FGL2Q14314 439 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 COL19A1Q14993 1142 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 SMU1Q2TAY7 513 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 TIGD2Q4W5G0 525 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 XKR6Q5GH73 641 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 COQ5Q5HYK3 327 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 KIAA1161Q6NSJ0 714 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 PRMT9Q6P2P2 845 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 AAGABQ6PD74 315 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 CYP20A1Q6UW02 462 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 XKR5Q6UX68 686 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 TRIM46Q7Z4K8 759 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 AMZ2Q86W34 360 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 RALGPS2Q86X27 583 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 ZFAND4Q86XD8 727 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 RGL4Q8IZJ4 473 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 LIX1Q8N485 282 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 RNF148Q8N7C7 305 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 IL17RCQ8NAC3 791 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 PPFIBP2Q8ND30 876 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 OR2L2Q8NH16 312 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 OR14C36Q8NHC7 312 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 TSPEARQ8WU66 669 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 SELENOMQ8WWX9 145 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 PYDC1Q8WXC3 89 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 VPS33AQ96AX1 596 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 TEX37Q96LM6 180 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 ZBTB18Q99592 522 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 TEX101Q9BY14 249 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 OSBPL6Q9BZF3 934 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 ACPTQ9BZG2 426 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 WDR26Q9H7D7 661 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 C8orf33Q9H7E9 229 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 S100A14Q9HCY8 104 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 SPAG4Q9NPE6 437 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 MRPL40Q9NQ50 206 aaKnown RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 MBNL1Q9NR56 388 aaKnown RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 PHPT1Q9NRX4 125 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 GID8Q9NWU2 228 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 STX18Q9P2W9 335 aaKnown RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 STOML1Q9UBI4 398 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 GULP1Q9UBP9 304 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 LEF1Q9UJU2 399 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 ZFR2Q9UPR6 939 aaKnown RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 C15orf41Q9Y2V0 281 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 CCL27Q9Y4X3 112 aa8.51□□□□□ -1.05
SMAD4-206ENST00000588860 PCYT1BQ9Y5K3 369 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 PTPRZ1P23471 2315 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-206ENST00000588860 A0A1W2PP18 115 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 A0A1W2PQF6 199 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 ASPDHA6ND91 283 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 PLRG1O43660 514 aaKnown RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 UGDHO60701 494 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 PRAMEF4O60810 478 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 SEC22BO75396 215 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 EEDO75530 441 aaKnown RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 SLC16A8O95907 504 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 TCN1P20061 433 aaPredicted RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 DRD1P21728 446 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 TEAD1P28347 426 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 IL12AP29459 219 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 MSX2P35548 267 aaPredicted RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 CASP2P42575 452 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 GNPDA1P46926 289 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 ZFP36L2P47974 494 aaKnown RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 PTDSS1P48651 473 aaKnown RBP8.5□□□□□ -1.05
SMAD4-206ENST00000588860 NEK2P51955 445 aa8.5□□□□□ -1.05
SMAD4-206ENST00000588860 SLC7A2P52569 658 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms