RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CDC16Q13042 620 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 TRAF3Q13114 568 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 TSTA3Q13630 321 aaPredicted RBP21.59■■□□□ 1.05
ATG4D-209ENST00000588857 PRRT3Q5FWE3 981 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 EFL1Q7Z2Z2 1120 aaKnown RBP21.59■■□□□ 1.05
ATG4D-209ENST00000588857 DCBLD1Q8N8Z6 715 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 OR4F6Q8NGB9 312 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 MAPK15Q8TD08 544 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 CAMK1GQ96NX5 476 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 KCNA7Q96RP8 456 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 EBF4Q9BQW3 602 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 NTMT1Q9BV86 223 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 ABCF3Q9NUQ8 709 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 TAAR2Q9P1P5 351 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 ZNF225Q9UK10 706 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 DCTN3O75935 186 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 ENO1P06733 434 aaKnown RBP21.58■■□□□ 1.05
ATG4D-209ENST00000588857 EBLN1P0CF75 366 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 GNSP15586 552 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 CCND1P24385 295 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 FOXA1P55317 472 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 TBPL1P62380 186 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 ZSCAN26Q16670 478 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 LETMD1Q6P1Q0 360 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 CDYL2Q8N8U2 506 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 CXorf40BQ96DE9 158 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 PPP1R36Q96LQ0 422 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 IL17FQ96PD4 163 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 NUSAP1Q9BXS6 441 aaKnown RBP21.58■■□□□ 1.05
ATG4D-209ENST00000588857 ACTR8Q9H981 624 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 CCDC177Q9NQR7 707 aaPredicted RBP21.58■■□□□ 1.05
ATG4D-209ENST00000588857 HEY2Q9UBP5 337 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 DNAJC15Q9Y5T4 150 aa21.58■■□□□ 1.05
ATG4D-209ENST00000588857 A6NCN8 305 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 PRR5-ARHGAP8B1AHC4 643 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 E7ENX8 843 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 CLDN9O95484 217 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 HGFP14210 728 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 SERPINB3P29508 390 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 TAP2Q03519 686 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 BTKQ06187 659 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 C1orf61Q13536 156 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 ELOCQ15369 112 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 UGT3A2Q3SY77 523 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 SLC9B1Q4ZJI4 515 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 ZNF771Q7L3S4 317 aaPredicted RBP21.57■■□□□ 1.04
ATG4D-209ENST00000588857 MYLK4Q86YV6 388 aaPredicted RBP21.57■■□□□ 1.04
ATG4D-209ENST00000588857 HOMEZQ8IX15 550 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 SUMF1Q8NBK3 374 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 METTL6Q8TCB7 284 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 MIPEPQ99797 713 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 LRRC61Q9BV99 259 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 RAB11FIP5Q9BXF6 653 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 CAAP1Q9H8G2 361 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 TIMM22Q9Y584 194 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 A0A1B0GTW7 788 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 HRO43593 1189 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 JUNP05412 331 aaKnown RBP21.57■■□□□ 1.04
ATG4D-209ENST00000588857 CAPN1P07384 714 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 SLC2A4P14672 509 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 EPORP19235 508 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 CYP2A13Q16696 494 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 PLK5Q496M5 336 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 THEMIS2Q5TEJ8 643 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 FOXR1Q6PIV2 292 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 ACAD11Q709F0 780 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 CEP68Q76N32 757 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 CHCHD4Q8N4Q1 142 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 TWIST2Q8WVJ9 160 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 MAGEB10Q96LZ2 347 aaPredicted RBP21.57■■□□□ 1.04
ATG4D-209ENST00000588857 SGPP1Q9BX95 441 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 PFDN4Q9NQP4 134 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 ZNF624Q9P2J8 865 aaPredicted RBP21.57■■□□□ 1.04
ATG4D-209ENST00000588857 DYRK1BQ9Y463 629 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 KCNE2Q9Y6J6 123 aa21.57■■□□□ 1.04
ATG4D-209ENST00000588857 ATXN2Q99700 1313 aaKnown RBP21.56■■□□□ 1.04
ATG4D-209ENST00000588857 TRBV23OR9-2A0A075B6M9 112 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 ERICH4A6NGS2 130 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 OR5K4A6NMS3 321 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 HGSO14964 777 aaPredicted RBP21.56■■□□□ 1.04
ATG4D-209ENST00000588857 CLGNO14967 610 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 CELA2BP08218 269 aaPredicted RBP21.56■■□□□ 1.04
ATG4D-209ENST00000588857 ERGP11308 486 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 HMOX2P30519 316 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 CNR2P34972 360 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 RAB28P51157 221 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 FASTKQ14296 549 aaKnown RBP21.56■■□□□ 1.04
ATG4D-209ENST00000588857 IYDQ6PHW0 289 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 TRIM48Q8IWZ4 208 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 DDIASQ8IXT1 998 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 LRRC56Q8IYG6 542 aaPredicted RBP21.56■■□□□ 1.04
ATG4D-209ENST00000588857 SETD7Q8WTS6 366 aaKnown RBP21.56■■□□□ 1.04
ATG4D-209ENST00000588857 STON2Q8WXE9 905 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 LRRC37BQ96QE4 947 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 OR4K3Q96R72 315 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 WDR55Q9H6Y2 383 aaPredicted RBP21.56■■□□□ 1.04
ATG4D-209ENST00000588857 KIR3DX1Q9H7L2 352 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 MEAF6Q9HAF1 191 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 TCF7L2Q9NQB0 619 aa21.56■■□□□ 1.04
ATG4D-209ENST00000588857 GPRC5BQ9NZH0 403 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms