RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 CTSL3PQ5NE16 218 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 YOD1Q5VVQ6 348 aaPredicted RBP16.3■□□□□ 0.2
TRIM47-203ENST00000586495 MRPL14Q6P1L8 145 aaKnown RBP16.3■□□□□ 0.2
TRIM47-203ENST00000586495 CASC4Q6P4E1 433 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 MRGPREQ86SM8 312 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 LMNTD1Q8N9Z9 388 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 LPGAT1Q92604 370 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 MAGOHBQ96A72 148 aaKnown RBP16.3■□□□□ 0.2
TRIM47-203ENST00000586495 PTERQ96BW5 349 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 BIRC8Q96P09 236 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 NAP1L3Q99457 506 aaPredicted RBP16.3■□□□□ 0.2
TRIM47-203ENST00000586495 SPATA7Q9P0W8 599 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 JRKLQ9Y4A0 524 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 NFS1Q9Y697 457 aa16.3■□□□□ 0.2
TRIM47-203ENST00000586495 SNRNP200O75643 2136 aaKnown RBP16.3■□□□□ 0.2
TRIM47-203ENST00000586495 A0A1B0GX78 115 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 MAGEB16A2A368 324 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 A6NL46 340 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 GOLGA8KD6RF30 607 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 GOLGA8TH3BQL2 631 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 PRICKLE3O43900 615 aaPredicted RBP16.29■□□□□ 0.2
TRIM47-203ENST00000586495 VPS4BO75351 444 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 MLNP12872 115 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 CHRM3P20309 590 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 ATP5DP30049 168 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 BDKRB1P46663 353 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 GRM7Q14831 915 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 SLC9A5Q14940 896 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 NAA25Q14CX7 972 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 FCRL6Q6DN72 434 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 CNSTQ6PJW8 725 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 TTLL10Q6ZVT0 673 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 RASGEF1CQ8N431 466 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 TTC29Q8NA56 475 aaPredicted RBP16.29■□□□□ 0.2
TRIM47-203ENST00000586495 CLEC1AQ8NC01 280 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 HMGCLL1Q8TB92 370 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 NUDT9Q9BW91 350 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 C5AR2Q9P296 337 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 VPS4AQ9UN37 437 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 CRYL1Q9Y2S2 319 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 NBASA2RRP1 2371 aa16.29■□□□□ 0.2
TRIM47-203ENST00000586495 TNRC6AQ8NDV7 1962 aaKnown RBP16.29■□□□□ 0.2
TRIM47-203ENST00000586495 E5RI56 91 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 SRPX2O60687 465 aaPredicted RBP16.28■□□□□ 0.2
TRIM47-203ENST00000586495 NIPSNAP2O75323 286 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 AVILO75366 819 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 ALBP02768 609 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 PKMP14618 531 aaKnown RBP16.28■□□□□ 0.2
TRIM47-203ENST00000586495 GRIA3P42263 894 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 GCGRP47871 477 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 GBX1Q14549 363 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 FAM214AQ32MH5 1076 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 NADK2Q4G0N4 442 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 NEPROQ6NW34 567 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 CPT1CQ8TCG5 803 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 FKBP10Q96AY3 582 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 NACC2Q96BF6 587 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 SMAD5Q99717 465 aaKnown RBP16.28■□□□□ 0.2
TRIM47-203ENST00000586495 MIPEPQ99797 713 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 SELENOSQ9BQE4 189 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 XAB2Q9HCS7 855 aaKnown RBP16.28■□□□□ 0.2
TRIM47-203ENST00000586495 CUTCQ9NTM9 273 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 INTS10Q9NVR2 710 aaKnown RBP16.28■□□□□ 0.2
TRIM47-203ENST00000586495 IL1RAPL1Q9NZN1 696 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 FAM169AQ9Y6X4 670 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 FER1L5A0AVI2 2057 aa16.28■□□□□ 0.2
TRIM47-203ENST00000586495 FAM237BA0A1B0GVD1 139 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 SDR42E2A6NKP2 422 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 DSCR3O14972 297 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 MATN4O95460 622 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 VARSP26640 1264 aaKnown RBP16.27■□□□□ 0.2
TRIM47-203ENST00000586495 THOC5Q13769 683 aaKnown RBP16.27■□□□□ 0.2
TRIM47-203ENST00000586495 DHX34Q14147 1143 aaKnown RBP16.27■□□□□ 0.2
TRIM47-203ENST00000586495 CYP2A13Q16696 494 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 CCSMST1Q4G0I0 132 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 ANKRD20A4Q4UJ75 823 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 DCAF10Q5QP82 559 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 VWA5B1Q5TIE3 1220 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 CCDC137Q6PK04 289 aaKnown RBP16.27■□□□□ 0.2
TRIM47-203ENST00000586495 OVCH1Q7RTY7 1134 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 CAND1Q86VP6 1230 aaKnown RBP16.27■□□□□ 0.2
TRIM47-203ENST00000586495 CILP2Q8IUL8 1156 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 FAM26EQ8N5C1 309 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 MCUQ8NE86 351 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 SLAMF7Q9NQ25 335 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 ENAMQ9NRM1 1142 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 FAM114A2Q9NRY5 505 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 P4HTMQ9NXG6 502 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 ANKMY1Q9P2S6 941 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 RUVBL2Q9Y230 463 aaKnown RBP16.27■□□□□ 0.2
TRIM47-203ENST00000586495 KLK4Q9Y5K2 254 aa16.27■□□□□ 0.2
TRIM47-203ENST00000586495 SETXQ7Z333 2677 aaKnown RBP16.27■□□□□ 0.19
TRIM47-203ENST00000586495 CTAGE9A4FU28 777 aa16.26■□□□□ 0.19
TRIM47-203ENST00000586495 CNOT3O75175 753 aaKnown RBP16.26■□□□□ 0.19
TRIM47-203ENST00000586495 SORBS2O94875 1100 aaKnown RBP16.26■□□□□ 0.19
TRIM47-203ENST00000586495 ONECUT2O95948 504 aa16.26■□□□□ 0.19
TRIM47-203ENST00000586495 ALPPP05187 535 aa16.26■□□□□ 0.19
TRIM47-203ENST00000586495 PSMB5P28074 263 aa16.26■□□□□ 0.19
TRIM47-203ENST00000586495 CMPK1P30085 196 aa16.26■□□□□ 0.19
TRIM47-203ENST00000586495 COILP38432 576 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms