RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 CRTC2Q53ET0 693 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 MANEAQ5SRI9 462 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 RBM20Q5T481 1227 aaKnown RBP13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 PAQR3Q6TCH7 311 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 CYHR1Q6ZMK1 362 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 UBE2R2Q712K3 238 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 SPNS2Q8IVW8 549 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 GPR135Q8IZ08 494 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 LMNTD1Q8N9Z9 388 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 LINC01555Q8NAE3 123 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 ZSCAN1Q8NBB4 408 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 FLVCR1-AS1Q8TAF5 88 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 ATL1Q8WXF7 558 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 N4BP2L2Q92802 583 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 KIAA1143Q96AT1 154 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 FAM136AQ96C01 138 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 ZNF501Q96CX3 271 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 ELMO2Q96JJ3 720 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 CCDC138Q96M89 665 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 NDNQ99608 321 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 GPR22Q99680 433 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 SLC30A3Q99726 388 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 C17orf62Q9BQA9 187 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 ULBP3Q9BZM4 244 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 CDC42EP4Q9H3Q1 356 aaKnown RBP13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 ANKZF1Q9H8Y5 726 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 PARVBQ9HBI1 364 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 LRRC4CQ9HCJ2 640 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 NINJ2Q9NZG7 142 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 GALPQ9UBC7 116 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.33□□□□□ -0.286e-9■□□□□ 10.2
PRKCSH-202ENST00000585540 SERTAD3Q9UJW9 196 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 PILRAQ9UKJ1 303 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 SRPK3Q9UPE1 567 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 AP1M2Q9Y6Q5 423 aa13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 V9GYY5 206 aaPredicted RBP13.33□□□□□ -0.28
PRKCSH-202ENST00000585540 PRICKLE3O43900 615 aaPredicted RBP13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 EBLN1P0CF75 366 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 TPBGLP0DKB5 382 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 MCM3P25205 808 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 PNLIPRP1P54315 467 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 ITGA1P56199 1179 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 CDKL1Q00532 357 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 MC1RQ01726 317 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 YOD1Q5VVQ6 348 aaPredicted RBP13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 TLDC1Q6P9B6 456 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 ADAMTSL2Q86TH1 951 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 CACNA2D3Q8IZS8 1091 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 IL22RA1Q8N6P7 574 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 NKD1Q969G9 470 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 LINGO1Q96FE5 620 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 CYTH2Q99418 400 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 DPH2Q9BQC3 489 aaPredicted RBP13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 PLAGL1Q9UM63 463 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 PSAT1Q9Y617 370 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 SDK2Q58EX2 2172 aa13.32□□□□□ -0.28
PRKCSH-202ENST00000585540 TEX51A0A1B0GUA7 166 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 CXorf49A8MYA2 514 aaPredicted RBP13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 C21orf140B9A014 251 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 E7EQ34 232 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 RECKO95980 971 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 CD63P08962 238 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 FAM153BP0C7A2 387 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 CCNYL3P0C7X3 344 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 FOLR1P15328 257 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 STMN1P16949 149 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 PEBP1P30086 187 aaKnown RBP13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 RPA3P35244 121 aaPredicted RBP13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 CDKN2DP55273 166 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 SH3BP2P78314 561 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 TIAL1Q01085 375 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 EFTUD2Q15029 972 aaKnown RBP eCLIP13.31□□□□□ -0.283e-8■■■■■ 37.8
PRKCSH-202ENST00000585540 SF1Q15637 639 aaKnown RBP13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 FAM153CQ494X1 144 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 TCTE1Q5JU00 501 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 FBXO38Q6PIJ6 1188 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 C6orf15Q6UXA7 325 aaPredicted RBP13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 CCDC81Q6ZN84 652 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 TAOK1Q7L7X3 1001 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 PIWIL4Q7Z3Z4 852 aaKnown RBP13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 TMEM126BQ8IUX1 230 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 CTAGE3PQ8IX95 158 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 SYTL1Q8IYJ3 562 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 PROKR1Q8TCW9 393 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 FBF1Q8TES7 1133 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 EEF1AKMT1Q8WVE0 214 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 GPAMQ9HCL2 828 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 APMAPQ9HDC9 416 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 SPHK1Q9NYA1 384 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 KCND3Q9UK17 655 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 PLCL2Q9UPR0 1127 aa13.31□□□□□ -0.28
PRKCSH-202ENST00000585540 TMEM150CB9EJG8 249 aa13.3□□□□□ -0.28
PRKCSH-202ENST00000585540 K7ENP7 123 aa13.3□□□□□ -0.28
PRKCSH-202ENST00000585540 SRPX2O60687 465 aaPredicted RBP13.3□□□□□ -0.28
PRKCSH-202ENST00000585540 SCRG1O75711 98 aa13.3□□□□□ -0.28
PRKCSH-202ENST00000585540 TSPAN12O95859 305 aa13.3□□□□□ -0.28
PRKCSH-202ENST00000585540 SLC16A8O95907 504 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms