RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 HEATR9A2RTY3 570 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 PDZK1P1A8MUH7 402 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 MEN1O00255 615 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 CPNE3O75131 537 aaKnown RBP11.1□□□□□ -0.63
NUP85-224ENST00000583948 CDH16O75309 829 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 PGLSO95336 258 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 NDST3O95803 873 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 INHBAP08476 426 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 CYP2A6P11509 494 aaPredicted RBP11.1□□□□□ -0.63
NUP85-224ENST00000583948 BPIP17213 487 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 XRCC1P18887 633 aaPredicted RBP11.1□□□□□ -0.63
NUP85-224ENST00000583948 HLA-DPA1P20036 260 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 CA4P22748 312 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 TEAD1P28347 426 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 MSH2P43246 934 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 PDE1BQ01064 536 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 ART3Q13508 389 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 SLC9A5Q14940 896 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 SLC14A2Q15849 920 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 ZNF630Q2M218 657 aaPredicted RBP11.1□□□□□ -0.63
NUP85-224ENST00000583948 KBTBD12Q3ZCT8 623 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 PCID2Q5JVF3 399 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 TRMT10BQ6PF06 316 aaKnown RBP11.1□□□□□ -0.63
NUP85-224ENST00000583948 RANBP10Q6VN20 620 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 MED25Q71SY5 747 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 DSELQ8IZU8 1212 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 GALNT16Q8N428 558 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 RIBC1Q8N443 379 aaPredicted RBP11.1□□□□□ -0.63
NUP85-224ENST00000583948 AMER2Q8N7J2 671 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 PPM1NQ8N819 430 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 TMEM102Q8N9M5 508 aaPredicted RBP11.1□□□□□ -0.63
NUP85-224ENST00000583948 CATSPER1Q8NEC5 780 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 LPCAT1Q8NF37 534 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 ZNF501Q96CX3 271 aaPredicted RBP11.1□□□□□ -0.63
NUP85-224ENST00000583948 SCRN2Q96FV2 425 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 CNDP1Q96KN2 507 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 PAFAH2Q99487 392 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 RUBCNLQ9H714 662 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 PPCSQ9HAB8 311 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 PLAC1Q9HBJ0 212 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 SLC40A1Q9NP59 571 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 CHRAC1Q9NRG0 131 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 AGPAT4Q9NRZ5 378 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 PSMC3IPQ9P2W1 217 aaPredicted RBP11.1□□□□□ -0.63
NUP85-224ENST00000583948 SLC24A2Q9UI40 661 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 G3BP2Q9UN86 482 aaKnown RBP11.1□□□□□ -0.63
NUP85-224ENST00000583948 CHKBQ9Y259 395 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 TCAF1Q9Y4C2 921 aa11.1□□□□□ -0.63
NUP85-224ENST00000583948 VPS13CQ709C8 3753 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 SEC16AO15027 2179 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 FAM237BA0A1B0GVD1 139 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 LOC285095A0A1B0GVY8 99 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 MAGEB16A2A368 324 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 TOX3O15405 576 aaPredicted RBP11.09□□□□□ -0.63
NUP85-224ENST00000583948 USP1O94782 785 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 NMBRP28336 390 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 GCAP28676 217 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 ATP5DP30049 168 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 HPDP32754 393 aaPredicted RBP11.09□□□□□ -0.63
NUP85-224ENST00000583948 PTGER4P35408 488 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 MAGOHP61326 146 aaKnown RBP11.09□□□□□ -0.63
NUP85-224ENST00000583948 AP1S1P61966 158 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 CBX1P83916 185 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 NSUN2Q08J23 767 aaKnown RBP eCLIP11.09□□□□□ -0.63
NUP85-224ENST00000583948 Q0VFX4 171 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 MYBPC3Q14896 1274 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 ANKRD20A4Q4UJ75 823 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 KHDC1Q4VXA5 237 aaKnown RBP11.09□□□□□ -0.63
NUP85-224ENST00000583948 Q71RC1 249 aaPredicted RBP11.09□□□□□ -0.63
NUP85-224ENST00000583948 MRGPREQ86SM8 312 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 ZADH2Q8N4Q0 377 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 FAM76AQ8TAV0 307 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 BLOC1S5Q8TDH9 187 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 FAR1Q8WVX9 515 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 NANOS1Q8WY41 292 aaKnown RBP11.09□□□□□ -0.63
NUP85-224ENST00000583948 CLIP3Q96DZ5 547 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 PGM2Q96G03 612 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 MCCC1Q96RQ3 725 aaPredicted RBP11.09□□□□□ -0.63
NUP85-224ENST00000583948 TDRD1Q9BXT4 1180 aaKnown RBP11.09□□□□□ -0.63
NUP85-224ENST00000583948 NLNQ9BYT8 704 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 KLHL25Q9H0H3 589 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 EPB41L1Q9H4G0 881 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 ARNT2Q9HBZ2 717 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 LATS2Q9NRM7 1088 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 PCMTD2Q9NV79 361 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 IL1RAPL1Q9NZN1 696 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 C5AR2Q9P296 337 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 LGALS13Q9UHV8 139 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 PCDHGB6Q9Y5F9 930 aa11.09□□□□□ -0.63
NUP85-224ENST00000583948 TRGV8A0A0C4DH27 118 aa11.08□□□□□ -0.64
NUP85-224ENST00000583948 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.08□□□□□ -0.64
NUP85-224ENST00000583948 FAM159BA6NKW6 160 aa11.08□□□□□ -0.64
NUP85-224ENST00000583948 CXorf49A8MYA2 514 aaPredicted RBP11.08□□□□□ -0.64
NUP85-224ENST00000583948 ZNHIT1O43257 154 aa11.08□□□□□ -0.64
NUP85-224ENST00000583948 NUAK1O60285 661 aa11.08□□□□□ -0.64
NUP85-224ENST00000583948 CNOT3O75175 753 aaKnown RBP11.08□□□□□ -0.64
NUP85-224ENST00000583948 JRKO75564 520 aa11.08□□□□□ -0.64
NUP85-224ENST00000583948 SLC4A1P02730 911 aa11.08□□□□□ -0.64
NUP85-224ENST00000583948 CTSBP07858 339 aa11.08□□□□□ -0.64
NUP85-224ENST00000583948 PIRTP0C851 137 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms