RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 GPRC5AQ8NFJ5 357 aa3.37□□□□□ -1.87
COPS3-217ENST00000583160 OR11H4Q8NGC9 324 aa3.37□□□□□ -1.87
COPS3-217ENST00000583160 RAD9AQ99638 391 aa3.37□□□□□ -1.87
COPS3-217ENST00000583160 MAK16Q9BXY0 300 aaKnown RBP3.37□□□□□ -1.87
COPS3-217ENST00000583160 MMP27Q9H306 513 aa3.37□□□□□ -1.87
COPS3-217ENST00000583160 OSGEPL1Q9H4B0 414 aa3.37□□□□□ -1.87
COPS3-217ENST00000583160 SYNCQ9H7C4 482 aa3.37□□□□□ -1.87
COPS3-217ENST00000583160 TBC1D17Q9HA65 648 aa3.37□□□□□ -1.87
COPS3-217ENST00000583160 PPANQ9NQ55 473 aaKnown RBP3.37□□□□□ -1.87
COPS3-217ENST00000583160 MAN2C1Q9NTJ4 1040 aa3.37□□□□□ -1.87
COPS3-217ENST00000583160 SPHK1Q9NYA1 384 aa3.37□□□□□ -1.87
COPS3-217ENST00000583160 ZNF215Q9UL58 517 aaPredicted RBP3.37□□□□□ -1.87
COPS3-217ENST00000583160 LAS1LQ9Y4W2 734 aaKnown RBP3.37□□□□□ -1.87
COPS3-217ENST00000583160 PCDH11YQ9BZA8 1340 aa3.37□□□□□ -1.87
COPS3-217ENST00000583160 ARID2Q68CP9 1835 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 ENO4A6NNW6 628 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 EPM2AB3EWF7 344 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 IDH3BO43837 385 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 CAPN2P17655 700 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 CDH3P22223 829 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 MNDAP41218 407 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 GCNT1Q02742 428 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 FASTKD3Q14CZ7 662 aaKnown RBP3.36□□□□□ -1.87
COPS3-217ENST00000583160 HERC3Q15034 1050 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 PDLIM3Q53GG5 364 aaPredicted RBP3.36□□□□□ -1.87
COPS3-217ENST00000583160 IGSF11Q5DX21 431 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 PLEKHS1Q5SXH7 462 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 KRT79Q5XKE5 535 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 TMEM173Q86WV6 379 aaPredicted RBP3.36□□□□□ -1.87
COPS3-217ENST00000583160 Q8N377 158 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 OR13C3Q8NGS6 347 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 ZNF486Q96H40 463 aaPredicted RBP3.36□□□□□ -1.87
COPS3-217ENST00000583160 C10orf90Q96M02 699 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 NECTIN4Q96NY8 510 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 OLFM1Q99784 485 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 SOSTQ9BQB4 213 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 KIFC3Q9BVG8 833 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 MIS12Q9H081 205 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 PSD3Q9NYI0 1048 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.36□□□□□ -1.87
COPS3-217ENST00000583160 TNNQ9UQP3 1299 aa3.36□□□□□ -1.87
COPS3-217ENST00000583160 PRG4Q92954 1404 aaPredicted RBP3.36□□□□□ -1.87
COPS3-217ENST00000583160 UHRF1BP1LA0JNW5 1464 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 GLI2P10070 1586 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 DIP2BQ9P265 1576 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 ADCY10Q96PN6 1610 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 IGHV3OR16-10A0A075B7F0 116 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 A0A1W2PQ09 198 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 EPHB6O15197 1021 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 GLRA3O75311 464 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 DDHD2O94830 711 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 SEC24AO95486 1093 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 BCL10O95999 233 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 TRIM21P19474 475 aaKnown RBP3.35□□□□□ -1.87
COPS3-217ENST00000583160 PRKACGP22612 351 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 LHCGRP22888 699 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 JAK1P23458 1154 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 RBMS1P29558 406 aaKnown RBP3.35□□□□□ -1.87
COPS3-217ENST00000583160 COX10Q12887 443 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 TAF10Q12962 218 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 CALCOCO2Q13137 446 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 TNIP1Q15025 636 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 ODF4Q2M2E3 257 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 LCN1P1Q5VSP4 162 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 LYSMD4Q5XG99 296 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 ADIPOR2Q86V24 386 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 KBTBD6Q86V97 674 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 NUDT13Q86X67 352 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.35□□□□□ -1.87
COPS3-217ENST00000583160 Q8NBF4 154 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 OR2L2Q8NH16 312 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 OR6S1Q8NH40 331 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 DHX58Q96C10 678 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 TRIM6Q9C030 488 aaPredicted RBP3.35□□□□□ -1.87
COPS3-217ENST00000583160 MUTYHQ9UIF7 546 aa3.35□□□□□ -1.87
COPS3-217ENST00000583160 ZNF646O15015 1829 aaPredicted RBP3.35□□□□□ -1.87
COPS3-217ENST00000583160 HCFC1P51610 2035 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 TMEM221A6NGB7 291 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 C2orf81A6NN90 581 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 AGAP14A8MT82 685 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 MPTX1A8MV57 137 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 ADAMDEC1O15204 470 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 DOK2O60496 412 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 ZBED4O75132 1171 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 CDK2AP2O75956 126 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 BAIAP3O94812 1187 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 C22orf31O95567 290 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 VTNP04004 478 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 PTPN3P26045 913 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 PGFP49763 221 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 CYCSP99999 105 aaKnown RBP3.34□□□□□ -1.87
COPS3-217ENST00000583160 MC1RQ01726 317 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 ZNF415Q09FC8 603 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 LMOD3Q0VAK6 560 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 DUSP28Q4G0W2 176 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 RNASEH2BQ5TBB1 312 aaKnown RBP3.34□□□□□ -1.87
COPS3-217ENST00000583160 POC5Q8NA72 575 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 NUP37Q8NFH4 326 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 OR1L3Q8NH93 324 aa3.34□□□□□ -1.87
COPS3-217ENST00000583160 EXD1Q8NHP7 514 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms