RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 RPA3P35244 121 aaPredicted RBP10.5□□□□□ -0.73
NDEL1-208ENST00000580237 CBSP35520 551 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 GPS2Q13227 327 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 PDAP1Q13442 181 aaKnown RBP10.5□□□□□ -0.73
NDEL1-208ENST00000580237 GRB7Q14451 532 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 GBX1Q14549 363 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 NAA25Q14CX7 972 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.5□□□□□ -0.73
NDEL1-208ENST00000580237 PRAMEF17Q5VTA0 474 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 ZNF549Q6P9A3 640 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 NEK10Q6ZWH5 1172 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 PIWIL4Q7Z3Z4 852 aaKnown RBP10.5□□□□□ -0.73
NDEL1-208ENST00000580237 IGDCC3Q8IVU1 814 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 CNTN4Q8IWV2 1026 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 SYTL1Q8IYJ3 562 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 MYO1HQ8N1T3 1032 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 FBXO36Q8NEA4 188 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 OR9A1PQ8NGU1 263 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 FLVCR1-AS1Q8TAF5 88 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 TRIM44Q96DX7 344 aaPredicted RBP10.5□□□□□ -0.73
NDEL1-208ENST00000580237 WBP1Q96G27 269 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 SLC30A3Q99726 388 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 MIPEPQ99797 713 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 ERP44Q9BS26 406 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 NDC1Q9BTX1 674 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 MENTQ9BUN1 341 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 TWSG1Q9GZX9 223 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 ACTL8Q9H568 366 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 FAM60AQ9NP50 221 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 WHRNQ9P202 907 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 SRPK3Q9UPE1 567 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 PLCL2Q9UPR0 1127 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 KLHL20Q9Y2M5 609 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 DHRS7Q9Y394 339 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 TEX264Q9Y6I9 313 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 AP1M2Q9Y6Q5 423 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 NBEAQ8NFP9 2946 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 MGAQ8IWI9 3026 aa10.5□□□□□ -0.73
NDEL1-208ENST00000580237 CDC14CA4D256 554 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 MYO1CO00159 1063 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 MEN1O00255 615 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 EIF3FO00303 357 aaPredicted RBP10.49□□□□□ -0.73
NDEL1-208ENST00000580237 ZNF749O43361 778 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 ZBTB14O43829 449 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 PSIP1O75475 530 aaKnown RBP10.49□□□□□ -0.73
NDEL1-208ENST00000580237 URI1O94763 535 aaPredicted RBP10.49□□□□□ -0.73
NDEL1-208ENST00000580237 CCNDBP1O95273 360 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 FKBP9O95302 570 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 FAM87AP0C7U9 286 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 MPC1LP0DKB6 136 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 AGXTP21549 392 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 CMPK1P30085 196 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 HSD17B2P37059 387 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 CCR10P46092 362 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 MGAT5Q09328 741 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 ERV3-1Q14264 604 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 FASTKD3Q14CZ7 662 aaKnown RBP10.49□□□□□ -0.73
NDEL1-208ENST00000580237 ZIC1Q15915 447 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 TBR1Q16650 682 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 DEFB109BQ30KR1 87 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 PTCHD3Q3KNS1 767 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 ZC3H12BQ5HYM0 836 aaKnown RBP10.49□□□□□ -0.73
NDEL1-208ENST00000580237 RBM20Q5T481 1227 aaKnown RBP10.49□□□□□ -0.73
NDEL1-208ENST00000580237 ATP1A1-AS1Q5TC04 95 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 THEMIS2Q5TEJ8 643 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 STEAP4Q687X5 459 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 C8orf74Q6P047 294 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 FAM199XQ6PEV8 388 aaPredicted RBP10.49□□□□□ -0.73
NDEL1-208ENST00000580237 TRMT10BQ6PF06 316 aaKnown RBP10.49□□□□□ -0.73
NDEL1-208ENST00000580237 UBE2R2Q712K3 238 aaPredicted RBP10.49□□□□□ -0.73
NDEL1-208ENST00000580237 CCDC25Q86WR0 208 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 ZNF655Q8N720 491 aaPredicted RBP10.49□□□□□ -0.73
NDEL1-208ENST00000580237 PYROXD1Q8WU10 500 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 SMPDL3AQ92484 453 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 SEC14L1Q92503 715 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 LINGO1Q96FE5 620 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 MED8Q96G25 268 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 LRFN5Q96NI6 719 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 ACAT2Q9BWD1 397 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 CHST8Q9H2A9 424 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 SAYSD1Q9NPB0 183 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 TXNDC16Q9P2K2 825 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 KLHL42Q9P2K6 505 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 CORO1CQ9ULV4 474 aaPredicted RBP10.49□□□□□ -0.73
NDEL1-208ENST00000580237 SNX7Q9UNH6 387 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 PADI2Q9Y2J8 665 aa10.49□□□□□ -0.73
NDEL1-208ENST00000580237 SPTA1P02549 2419 aa10.48□□□□□ -0.73
NDEL1-208ENST00000580237 LAMA5O15230 3695 aa10.48□□□□□ -0.73
NDEL1-208ENST00000580237 CREG1O75629 220 aa10.48□□□□□ -0.73
NDEL1-208ENST00000580237 SAT1P21673 171 aa10.48□□□□□ -0.73
NDEL1-208ENST00000580237 F8A1P23610 371 aa10.48□□□□□ -0.73
NDEL1-208ENST00000580237 SKIV2L2P42285 1042 aaKnown RBP10.48□□□□□ -0.73
NDEL1-208ENST00000580237 PNLIPRP1P54315 467 aa10.48□□□□□ -0.73
NDEL1-208ENST00000580237 POLE2P56282 527 aa10.48□□□□□ -0.73
NDEL1-208ENST00000580237 RPS18P62269 152 aaKnown RBP10.48□□□□□ -0.73
NDEL1-208ENST00000580237 C19orf57Q0VDD7 668 aa10.48□□□□□ -0.73
NDEL1-208ENST00000580237 SP140Q13342 867 aa10.48□□□□□ -0.73
NDEL1-208ENST00000580237 ARHGAP19Q14CB8 494 aa10.48□□□□□ -0.73
NDEL1-208ENST00000580237 TEDDM1Q5T9Z0 273 aa10.48□□□□□ -0.73
NDEL1-208ENST00000580237 C1orf189Q5VU69 101 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms