RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 AP2A2O94973 939 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 SLC25A14O95258 325 aaPredicted RBP9.92□□□□□ -0.82
SS18-210ENST00000578700 ITGB2P05107 769 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 CBSLP0DN79 551 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 KITP10721 976 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 LIPCP11150 499 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 IMPDH1P20839 514 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 CBSP35520 551 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 GMPRP36959 345 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 ETV5P41161 510 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 LIG3P49916 1009 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 PGGT1BP53609 377 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 EIF3IQ13347 325 aaKnown RBP9.92□□□□□ -0.82
SS18-210ENST00000578700 ELOCQ15369 112 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 ATP13A5Q4VNC0 1218 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 CTSL3PQ5NE16 218 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 C6orf89Q6UWU4 347 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 GPSM1Q86YR5 675 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 ZBTB2Q8N680 514 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 ARL10Q8N8L6 244 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 DENND6BQ8NEG7 585 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 C10orf82Q8WW14 230 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 CCT6BQ92526 530 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 EXT2Q93063 718 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 AP2M1Q96CW1 435 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 FAR2Q96K12 515 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 WRAP53Q9BUR4 548 aaKnown RBP9.92□□□□□ -0.82
SS18-210ENST00000578700 GATA5Q9BWX5 397 aaPredicted RBP9.92□□□□□ -0.82
SS18-210ENST00000578700 UNKQ9C0B0 810 aaKnown RBP9.92□□□□□ -0.82
SS18-210ENST00000578700 TXLNGQ9NUQ3 528 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 KLHL42Q9P2K6 505 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 ANKMY1Q9P2S6 941 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 VTI1BQ9UEU0 232 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 MARCOQ9UEW3 520 aaPredicted RBP9.92□□□□□ -0.82
SS18-210ENST00000578700 CD84Q9UIB8 345 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 ZFP69BQ9UJL9 534 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 COQ6Q9Y2Z9 468 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 DHRS7Q9Y394 339 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 PCDHGA4Q9Y5G9 962 aa9.92□□□□□ -0.82
SS18-210ENST00000578700 PRRC2CQ9Y520 2896 aaKnown RBP9.91□□□□□ -0.82
SS18-210ENST00000578700 A0A1W2PQM1 296 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 A8MT66 165 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 TARM1B6A8C7 271 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 D6RAR5 112 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 EIF3FO00303 357 aaPredicted RBP9.91□□□□□ -0.82
SS18-210ENST00000578700 GAPDHSO14556 408 aaPredicted RBP9.91□□□□□ -0.82
SS18-210ENST00000578700 HNRNPCL1O60812 293 aaKnown RBP9.91□□□□□ -0.82
SS18-210ENST00000578700 LYPLA1O75608 230 aaPredicted RBP9.91□□□□□ -0.82
SS18-210ENST00000578700 WISP3O95389 354 aaPredicted RBP9.91□□□□□ -0.82
SS18-210ENST00000578700 FTH1P02794 183 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 ENO3P13929 434 aaPredicted RBP9.91□□□□□ -0.82
SS18-210ENST00000578700 WT1P19544 449 aaPredicted RBP9.91□□□□□ -0.82
SS18-210ENST00000578700 ETV3P41162 512 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 RASSF2P50749 326 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 RPL14P50914 215 aaKnown RBP9.91□□□□□ -0.82
SS18-210ENST00000578700 BLKP51451 505 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 CLCN7P51798 805 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 YPEL5P62699 121 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 CLCA4Q14CN2 919 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 IGFBP7Q16270 282 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 SPDYAQ5MJ70 313 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 PHF19Q5T6S3 580 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 GPRC6AQ5T6X5 926 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 TMEM207Q6UWW9 146 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 LIPIQ6XZB0 460 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 Q6ZVL8 140 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 ZNF765Q7L2R6 523 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 HSD11B1LQ7Z5J1 315 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 ADAMTSL2Q86TH1 951 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 ISCA2Q86U28 154 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 PHYKPLQ8IUZ5 450 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 CPNE9Q8IYJ1 553 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 RFWD2Q8NHY2 731 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 CD200R1Q8TD46 325 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 EEF1AKMT1Q8WVE0 214 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 PDLIM5Q96HC4 596 aaKnown RBP9.91□□□□□ -0.82
SS18-210ENST00000578700 RIOK2Q9BVS4 552 aaKnown RBP9.91□□□□□ -0.82
SS18-210ENST00000578700 C1QTNF7Q9BXJ2 289 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 TRIM54Q9BYV2 358 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 SLC25A18Q9H1K4 315 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 CYP4F12Q9HCS2 524 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 CD274Q9NZQ7 290 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 FOXJ2Q9P0K8 574 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 HEY2Q9UBP5 337 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 TRIM33Q9UPN9 1127 aa9.91□□□□□ -0.82
SS18-210ENST00000578700 USP9XQ93008 2570 aaPredicted RBP9.91□□□□□ -0.82
SS18-210ENST00000578700 NPEPPSL1A6NEC2 478 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 TRPC5OSA6NMA1 111 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 NVLO15381 856 aaKnown RBP9.9□□□□□ -0.82
SS18-210ENST00000578700 ITM2AO43736 263 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 DIAPH2O60879 1101 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 SUPT7LO94864 414 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 SBK3P0C264 359 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 ATP1B2P14415 290 aaPredicted RBP9.9□□□□□ -0.82
SS18-210ENST00000578700 MAPK9P45984 424 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 HK3P52790 923 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 HERVK_113P63132 956 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 TIAL1Q01085 375 aaKnown RBP eCLIP9.9□□□□□ -0.82
SS18-210ENST00000578700 RALGDSQ12967 914 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 GTF2H3Q13889 308 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms