RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SLC38A9Q8NBW4 561 aa15.47■□□□□ 0.07
VAPA-204ENST00000577901 OR5AR1Q8NGP9 310 aa15.47■□□□□ 0.07
VAPA-204ENST00000577901 SKA2Q8WVK7 121 aaPredicted RBP15.47■□□□□ 0.07
VAPA-204ENST00000577901 HGH1Q9BTY7 390 aa15.47■□□□□ 0.07
VAPA-204ENST00000577901 CHST8Q9H2A9 424 aa15.47■□□□□ 0.07
VAPA-204ENST00000577901 IARS2Q9NSE4 1012 aaKnown RBP15.47■□□□□ 0.07
VAPA-204ENST00000577901 SOHLH2Q9NX45 425 aa15.47■□□□□ 0.07
VAPA-204ENST00000577901 WHRNQ9P202 907 aa15.47■□□□□ 0.07
VAPA-204ENST00000577901 ZC3H7BQ9UGR2 993 aaKnown RBP15.47■□□□□ 0.07
VAPA-204ENST00000577901 FBXO5Q9UKT4 447 aa15.47■□□□□ 0.07
VAPA-204ENST00000577901 CDYLQ9Y232 598 aa15.47■□□□□ 0.07
VAPA-204ENST00000577901 TDRKHQ9Y2W6 561 aaKnown RBP15.47■□□□□ 0.07
VAPA-204ENST00000577901 UTP11Q9Y3A2 253 aaKnown RBP15.47■□□□□ 0.07
VAPA-204ENST00000577901 COMMD10Q9Y6G5 202 aa15.47■□□□□ 0.07
VAPA-204ENST00000577901 PIKFYVEQ9Y2I7 2098 aa15.47■□□□□ 0.07
VAPA-204ENST00000577901 GSAPA4D1B5 854 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 KIF2AO00139 706 aaPredicted RBP15.46■□□□□ 0.07
VAPA-204ENST00000577901 RAD51CO43502 376 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 NIPSNAP2O75323 286 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 BANF1O75531 89 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 SORBS2O94875 1100 aaKnown RBP15.46■□□□□ 0.07
VAPA-204ENST00000577901 KLK3P07288 261 aaPredicted RBP15.46■□□□□ 0.07
VAPA-204ENST00000577901 POLR2CP19387 275 aaPredicted RBP15.46■□□□□ 0.07
VAPA-204ENST00000577901 MRPS25P82663 173 aaKnown RBP15.46■□□□□ 0.07
VAPA-204ENST00000577901 HP1BP3Q5SSJ5 553 aaPredicted RBP15.46■□□□□ 0.07
VAPA-204ENST00000577901 FBXO38Q6PIJ6 1188 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 UNC5DQ6UXZ4 953 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 VRK3Q8IV63 474 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 CARFQ8N187 725 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 CFAP61Q8NHU2 1237 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 SSC4DQ8WTU2 575 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 PWWP2AQ96N64 755 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 FOPNLQ96NB1 174 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 LRFN5Q96NI6 719 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 RAB17Q9H0T7 212 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 PPANQ9NQ55 473 aaKnown RBP15.46■□□□□ 0.07
VAPA-204ENST00000577901 FBXO6Q9NRD1 293 aaPredicted RBP15.46■□□□□ 0.07
VAPA-204ENST00000577901 LATS2Q9NRM7 1088 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 ZNF451Q9Y4E5 1061 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 MRFAP1Q9Y605 127 aa15.46■□□□□ 0.07
VAPA-204ENST00000577901 TNRC6AQ8NDV7 1962 aaKnown RBP15.45■□□□□ 0.06
VAPA-204ENST00000577901 C2orf74A8MZ97 194 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 MEN1O00255 615 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 MAP3K7O43318 606 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 SEMA7AO75326 666 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 RAB40ALP0C0E4 278 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 ERVK-10P10266 1014 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 SLC1A2P43004 574 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 KPNA2P52292 529 aaKnown RBP15.45■□□□□ 0.06
VAPA-204ENST00000577901 PDIA2Q13087 525 aaKnown RBP15.45■□□□□ 0.06
VAPA-204ENST00000577901 WHAMMP3Q1A5X7 153 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 TTLL9Q3SXZ7 439 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 ZNF789Q5FWF6 425 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 LCN10Q6JVE6 187 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 IGDCC3Q8IVU1 814 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 ENDOVQ8N8Q3 282 aaKnown RBP15.45■□□□□ 0.06
VAPA-204ENST00000577901 ADAMTS17Q8TE56 1095 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 CERS2Q96G23 380 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 CFAP36Q96G28 342 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 PPM1MQ96MI6 270 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 DPH5Q9H2P9 285 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 XKR8Q9H6D3 395 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 OR6C2Q9NZP2 312 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 SNX7Q9UNH6 387 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 CHMP2BQ9UQN3 213 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 BTRCQ9Y297 605 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 PCDHGB7Q9Y5F8 929 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 TEX264Q9Y6I9 313 aa15.45■□□□□ 0.06
VAPA-204ENST00000577901 BTN3A3O00478 584 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 BTN3A1O00481 513 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 TP73O15350 636 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 CEACAM4O75871 244 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 HAUS5O94927 633 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 CDH3P22223 829 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 PRDX3P30048 256 aaKnown RBP15.44■□□□□ 0.06
VAPA-204ENST00000577901 ATP5DP30049 168 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 CARSP49589 748 aaKnown RBP15.44■□□□□ 0.06
VAPA-204ENST00000577901 CAV1Q03135 178 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 INPP5JQ15735 1006 aaPredicted RBP15.44■□□□□ 0.06
VAPA-204ENST00000577901 PRAMEF17Q5VTA0 474 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 DUPD1Q68J44 220 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 UNC5AQ6ZN44 842 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 KIAA0408Q6ZU52 694 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 DCUN1D3Q8IWE4 304 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 DSELQ8IZU8 1212 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 ZBTB2Q8N680 514 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 C2CD4AQ8NCU7 369 aaPredicted RBP15.44■□□□□ 0.06
VAPA-204ENST00000577901 FDCSPQ8NFU4 85 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 MAGEC3Q8TD91 643 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 FAM136AQ96C01 138 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 CLIP3Q96DZ5 547 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 NLNQ9BYT8 704 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 FANCEQ9HB96 536 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 C1GALT1Q9NS00 363 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 CUEDC1Q9NWM3 386 aaPredicted RBP15.44■□□□□ 0.06
VAPA-204ENST00000577901 KLHL42Q9P2K6 505 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 POMT2Q9UKY4 750 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 TCFL5Q9UL49 500 aa15.44■□□□□ 0.06
VAPA-204ENST00000577901 G3BP2Q9UN86 482 aaKnown RBP15.44■□□□□ 0.06
VAPA-204ENST00000577901 ICKQ9UPZ9 632 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms