RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 DCUN1D3Q8IWE4 304 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SPACA3Q8IXA5 215 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ARL10Q8N8L6 244 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 OR6C4Q8NGE1 309 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 OR9A1PQ8NGU1 263 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 OR6Y1Q8NGX8 325 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 FGF11Q92914 225 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CCDC126Q96EE4 140 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 C12orf66Q96MD2 445 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TRIM54Q9BYV2 358 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TRIT1Q9H3H1 467 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CPNE7Q9UBL6 633 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PSMD13Q9UNM6 376 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ASF1AQ9Y294 204 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TDRD6O60522 2096 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 BSNQ9UPA5 3926 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TMEM120BA0PK00 339 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 OR52A4PA6NMU1 304 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PDZK1P1A8MUH7 402 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 STX16-NPEPL1H3BU86 382 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 STX16O14662 325 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 BIRC5O15392 142 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 FFAR2O15552 330 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 NUDT21O43809 227 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 KDM1AO60341 852 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SNX2O60749 519 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SPAG7O75391 227 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 HIST1H2AGP0C0S8 130 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ALPPL2P10696 532 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 GLB1P16278 677 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 HIST1H2ADP20671 130 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 GPR3P46089 330 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 NAA20P61599 178 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PCDH1Q08174 1060 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SQSTM1Q13501 440 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CYP2A13Q16696 494 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ZXDCQ2QGD7 858 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 C14orf28Q4W4Y0 310 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SULT1C3Q6IMI6 304 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ZYG11AQ6WRX3 759 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 LRRC56Q8IYG6 542 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TCAIMQ8N3R3 496 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ARL14Q8N4G2 192 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 OR5AR1Q8NGP9 310 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 MAPK15Q8TD08 544 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SLC37A2Q8TED4 501 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ATL1Q8WXF7 558 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SH3KBP1Q96B97 665 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 RHBDF1Q96CC6 855 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 FBXL8Q96CD0 374 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 HIST1H2AHQ96KK5 128 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 FERD3LQ96RJ6 166 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 HIST1H2AJQ99878 128 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 H2AFJQ9BTM1 129 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 NRSN2Q9GZP1 204 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ALG9Q9H6U8 611 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 NUDT4Q9NZJ9 180 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SPATA7Q9P0W8 599 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 COPG2Q9UBF2 871 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 MID2Q9UJV3 735 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 DOLKQ9UPQ8 538 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ITPR3Q14573 2671 aa10.8□□□□□ -0.68
CDK5RAP3-204ENST00000577664 LY6G6EA0A0G2JKS1 128 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 EME2A4GXA9 379 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CLEC18AA5D8T8 446 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 NPEPPSL1A6NEC2 478 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 LILRA5A6NI73 299 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 H3BQF6 201 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TRIM38O00635 465 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PPM1DO15297 605 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 FLRT2O43155 660 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PRICKLE3O43900 615 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SDC3O75056 442 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 IPO13O94829 963 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 VIPP01282 170 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ANXA5P08758 320 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CPA3P15088 417 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ATP5F1P24539 256 aaPredicted RBP10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 MAP4P27816 1152 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 GLRBP48167 497 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PRKAA2P54646 552 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ALDH18A1P54886 795 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 UCNP55089 124 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 WDR4P57081 412 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PPP2R2AP63151 447 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 UBAP2LQ14157 1087 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PCBP2Q15366 365 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SEPT7Q16181 437 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 DEFB133Q30KQ1 61 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PROX2Q3B8N5 592 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 C4orf17Q53FE4 359 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 C16orf46Q6P387 395 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CLEC18BQ6UXF7 455 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TMEM26Q6ZUK4 368 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PRICKLE2Q7Z3G6 844 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SLC22A9Q8IVM8 553 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CLEC18CQ8NCF0 446 aa10.79□□□□□ -0.68
CDK5RAP3-204ENST00000577664 OR56A3Q8NH54 315 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms