RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 UCK1Q9HA47 277 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 PPANQ9NQ55 473 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 NINJ2Q9NZG7 142 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 CRIM1Q9NZV1 1036 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 IKZF3Q9UKT9 509 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 SATB2Q9UPW6 733 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 ICKQ9UPZ9 632 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 ADAMTS20P59510 1910 aa9.19□□□□□ -0.94
NPLOC4-219ENST00000576713 KLHL33A6NCF5 533 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 FAM159BA6NKW6 160 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 A8MU76 341 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 TAF4O00268 1085 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 QSOX1O00391 747 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 EIF3HO15372 352 aaKnown RBP eCLIP9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 C9P02748 559 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 GSTM1P09488 218 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 FAM153BP0C7A2 387 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 CDK4P11802 303 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 CCL4P13236 92 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 SLC2A4P14672 509 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 CHRM3P20309 590 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 PEBP1P30086 187 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 CCKBRP32239 447 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 DEKP35659 375 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 BDKRB1P46663 353 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 CAPZBP47756 277 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 LSSP48449 732 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 CD151P48509 253 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 LIMK2P53671 638 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 INHBCP55103 352 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 CAV1Q03135 178 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 MN1Q10571 1320 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 BIRC2Q13490 618 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 ZNF460Q14592 562 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 KYNUQ16719 465 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 FAM153CQ494X1 144 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 C3orf38Q5JPI3 329 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 PHF19Q5T6S3 580 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 LRFN4Q6PJG9 635 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 TMEM207Q6UWW9 146 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 CYHR1Q6ZMK1 362 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 PIWIL4Q7Z3Z4 852 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 RASGRP3Q8IV61 690 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 LMNTD2Q8IXW0 634 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 CPNE9Q8IYJ1 553 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 ZBTB2Q8N680 514 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 LINC01555Q8NAE3 123 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 CFAP61Q8NHU2 1237 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 FLVCR1-AS1Q8TAF5 88 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 DLG3Q92796 817 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 TMEM159Q96B96 161 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 FAM46AQ96IP4 442 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 EAF1Q96JC9 268 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 IL17FQ96PD4 163 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 TGM7Q96PF1 710 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 DEPDC7Q96QD5 511 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 TTC1Q99614 292 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 SSBP4Q9BWG4 385 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 VPS37BQ9H9H4 285 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 OCIAD1Q9NX40 245 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 SPHK1Q9NYA1 384 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 PDP2Q9P2J9 529 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 KLHL3Q9UH77 587 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 NFU1Q9UMS0 254 aa9.18□□□□□ -0.94
NPLOC4-219ENST00000576713 PIKFYVEQ9Y2I7 2098 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 ATMQ13315 3056 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 EPG5Q9HCE0 2579 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 OR6C74A6NCV1 312 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 OR5K3A6NET4 321 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 BTN3A1O00481 513 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 DUX1O43812 170 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 PRAMEF10O60809 474 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 KRT37O76014 449 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 MATN4O95460 622 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 TSPAN12O95859 305 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 POLR2CP19387 275 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 MCM3P25205 808 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 PPARGP37231 505 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 KPNA2P52292 529 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 CYP4F3Q08477 520 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 MGAT5Q09328 741 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 RTP5Q14D33 572 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 PLCL1Q15111 1095 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 KLHL38Q2WGJ6 581 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 KBTBD12Q3ZCT8 623 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 GLE1Q53GS7 698 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 PLEKHS1Q5SXH7 462 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 HECTD2Q5U5R9 776 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 TMEM71Q6P5X7 295 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 WDR74Q6RFH5 385 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 PAQR3Q6TCH7 311 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 FAM92BQ6ZTR7 304 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 KIAA0408Q6ZU52 694 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 C3orf62Q6ZUJ4 267 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 OTOAQ7RTW8 1153 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 ARHGAP22Q7Z5H3 698 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 STRA8Q7Z7C7 330 aa9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 ZC3HC1Q86WB0 502 aaKnown RBP9.17□□□□□ -0.94
NPLOC4-219ENST00000576713 CEP97Q8IW35 865 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms