RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, human

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDE1-211	ENST00000576502	CLCN7	P51798	805 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	ARSF	P54793	590 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	ILF2	Q12905	390 aa	Known RBP	13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	KCTD19	Q17RG1	926 aa	Predicted RBP	13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	YOD1	Q5VVQ6	348 aa	Predicted RBP	13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	MAATS1	Q7Z4T9	603 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	GALNT7	Q86SF2	657 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	EXD3	Q8N9H8	876 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	TTC29	Q8NA56	475 aa	Predicted RBP	13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	LINC01555	Q8NAE3	123 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	FLVCR1-AS1	Q8TAF5	88 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	SMPDL3A	Q92484	453 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	RNF31	Q96EP0	1072 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	IL17F	Q96PD4	163 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	NRTN	Q99748	197 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	TRIM56	Q9BRZ2	755 aa	Known RBP	13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	MENT	Q9BUN1	341 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	NLN	Q9BYT8	704 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	CHST8	Q9H2A9	424 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	PPAN	Q9NQ55	473 aa	Known RBP	13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	PCMTD2	Q9NV79	361 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	TAS2R13	Q9NYV9	303 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	G3BP2	Q9UN86	482 aa	Known RBP	13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	DHRS7	Q9Y394	339 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	NFS1	Q9Y697	457 aa		13.32	□□□□□ -0.28
NDE1-211	ENST00000576502	EFCAB8	A8MWE9	144 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	MKRN2OS	H3BPM6	223 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	PSIP1	O75475	530 aa	Known RBP	13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	RFPL1	O75677	317 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	PIM1	P11309	404 aa	Predicted RBP	13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	PEBP1	P30086	187 aa	Known RBP	13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	RPA3	P35244	121 aa	Predicted RBP	13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	RORA	P35398	523 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	NFATC3	Q12968	1075 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	CALCOCO2	Q13137	446 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	GRB7	Q14451	532 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	CYP2A13	Q16696	494 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	UGT8	Q16880	541 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	DEFB110	Q30KQ9	67 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	ACSBG2	Q5FVE4	666 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	ZNF789	Q5FWF6	425 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	RHBDD2	Q6NTF9	364 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	FIGLA	Q6QHK4	219 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	RAB43	Q86YS6	212 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	DNAJC22	Q8N4W6	341 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	LMNTD1	Q8N9Z9	388 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	CERS2	Q96G23	380 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	GPR21	Q99679	349 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	AARSD1	Q9BTE6	412 aa	Known RBP	13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	SEMA4C	Q9C0C4	833 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	FAM60A	Q9NP50	221 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	STARD5	Q9NSY2	213 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	EURL	Q9NYK6	297 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	ANKMY1	Q9P2S6	941 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	NDOR1	Q9UHB4	597 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	CIDEB	Q9UHD4	219 aa		13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	TSR3	Q9UJK0	312 aa	Known RBP	13.31	□□□□□ -0.28
NDE1-211	ENST00000576502	FAM187A	A6NFU0	413 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	ARHGEF33	A8MVX0	844 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	MYO1C	O00159	1063 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	TTI1	O43156	1089 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	SRPX2	O60687	465 aa	Predicted RBP	13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	SEC31A	O94979	1220 aa	Known RBP	13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	ERVK-10	P10266	1014 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	IVD	P26440	423 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	ITGA8	P53708	1063 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	PMS2	P54278	862 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	DCD	P81605	110 aa	Known RBP	13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	MPP1	Q00013	466 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	GRM7	Q14831	915 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	NCF4	Q15080	339 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	ZIC1	Q15915	447 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	MCAT	Q8IVS2	390 aa	Known RBP	13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	CNTN4	Q8IWV2	1026 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	ZNF655	Q8N720	491 aa	Predicted RBP	13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	ENDOV	Q8N8Q3	282 aa	Known RBP	13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	SLC38A9	Q8NBW4	561 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	CFAP36	Q96G28	342 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	IP6K3	Q96PC2	410 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	KRT12	Q99456	494 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	SELENOS	Q9BQE4	189 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	RUVBL2	Q9Y230	463 aa	Known RBP	13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	KLK4	Q9Y5K2	254 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	KCNMB2	Q9Y691	235 aa		13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	TLN1	Q9Y490	2541 aa	Known RBP	13.3	□□□□□ -0.28
NDE1-211	ENST00000576502	HAUS5	O94927	633 aa		13.29	□□□□□ -0.28
NDE1-211	ENST00000576502	SYF2	O95926	243 aa	Known RBP	13.29	□□□□□ -0.28
NDE1-211	ENST00000576502	IGHE	P01854	428 aa		13.29	□□□□□ -0.28
NDE1-211	ENST00000576502	C8G	P07360	202 aa		13.29	□□□□□ -0.28
NDE1-211	ENST00000576502	ERG	P11308	486 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms