RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 POP5Q969H6 163 aaKnown RBP16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 MYO19Q96H55 970 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 ZNF641Q96N77 438 aaPredicted RBP16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 TTLL2Q9BWV7 592 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 PCDH12Q9NPG4 1184 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 SCN3BQ9NY72 215 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 SAMD4AQ9UPU9 718 aaKnown RBP16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 PMF1-BGLAPU3KQ54 211 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 SEPT4O43236 478 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 STK16O75716 305 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 CLDN9O95484 217 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 FADS2O95864 444 aaKnown RBP16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 PDYNP01213 254 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 KRT6AP02538 564 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 KRT6BP04259 564 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 BMP1P13497 986 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 HOXB9P17482 250 aaPredicted RBP16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 MZF1P28698 734 aaPredicted RBP16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 PTPN6P29350 595 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 KRT6CP48668 564 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 SLC14A1Q13336 389 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 KEAP1Q14145 624 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 GBX1Q14549 363 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 CLCA4Q14CN2 919 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 HECTD3Q5T447 861 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 GPRC6AQ5T6X5 926 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 ARMC12Q5T9G4 340 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 OR2T5Q6IEZ7 315 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 DOK6Q6PKX4 331 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 ZNF551Q7Z340 670 aaPredicted RBP16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 SNX20Q7Z614 316 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 OR6K2Q8NGY2 324 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 OR2T29Q8NH02 315 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 PLD4Q96BZ4 506 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 SLC29A3Q9BZD2 475 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 CWH43Q9H720 699 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 GIN1Q9NXP7 522 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 GMPPBQ9Y5P6 360 aa16.79■□□□□ 0.28
TOM1L1-221ENST00000575882 CCNDBP1O95273 360 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 MT-ND2P03891 347 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 ITGALP20701 1170 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 ARHGDIAP52565 204 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 NCS1P62166 190 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 FAM189BP81408 668 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 MBTPS1Q14703 1052 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 ADGRF1Q5T601 910 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 SYT6Q5T7P8 510 aaPredicted RBP16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 OR6Q1Q8NGQ2 317 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 WBP2Q969T9 261 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 ERLEC1Q96DZ1 483 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 ABHD8Q96I13 439 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 ZNF300Q96RE9 604 aaPredicted RBP16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 FBXO8Q9NRD0 319 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 MARCH5Q9NX47 278 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 GPRC5BQ9NZH0 403 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 HCSTQ9UBK5 93 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 PPT2Q9UMR5 302 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 ZNF840PA6NDX5 716 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 LRATO95237 230 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 CKBP12277 381 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 TACR1P25103 407 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 ST13P50502 369 aaKnown RBP16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 DNASE1L3Q13609 305 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 SMN1Q16637 294 aaKnown RBP16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 KDM4DQ6B0I6 523 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 MINDY2Q8NBR6 621 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 ZNF540Q8NDQ6 660 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 DYNC2LI1Q8TCX1 351 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 PIH1D2Q8WWB5 315 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 SELENOMQ8WWX9 145 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 MYOCQ99972 504 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 ZFYVE1Q9HBF4 777 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 IL26Q9NPH9 171 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 DNMT3BQ9UBC3 853 aaKnown RBP16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 HSPE1-MOB4S4R3N1 261 aa16.78■□□□□ 0.28
TOM1L1-221ENST00000575882 hCG_2039718K7EN88 272 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 RFXANKO14593 260 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 DIRAS1O95057 198 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 PGLSO95336 258 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 PARNO95453 639 aaKnown RBP16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 EPORP19235 508 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 ACRV1P26436 265 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 TMED10P49755 219 aaKnown RBP16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 CXCR4P61073 352 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 FUT10Q6P4F1 479 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 RASAL3Q86YV0 1011 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 CADM3Q8N126 398 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 TBC1D20Q96BZ9 403 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 APOL4Q9BPW4 351 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 TM6SF2Q9BZW4 377 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 TM9SF3Q9HD45 589 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 IL1RAPQ9NPH3 570 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 CRLS1Q9UJA2 301 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 NT5C1B-RDH14C9J2C7 533 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 SCAMP3O14828 347 aaKnown RBP16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 RGS10O43665 173 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 C1QCP02747 245 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 ALOX5P09917 674 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 TGM1P22735 817 aa16.77■□□□□ 0.28
TOM1L1-221ENST00000575882 NEK2P51955 445 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms