RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 BBS7Q8IWZ6 715 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 FBLIM1Q8WUP2 373 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 ASB11Q8WXH4 323 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 BORCS5Q969J3 196 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 TBC1D20Q96BZ9 403 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 NRBF2Q96F24 287 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 MAGED4Q96JG8 741 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 FCRL1Q96LA6 429 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 MCCC1Q96RQ3 725 aaPredicted RBP8.71□□□□□ -1.01
NCBP3-204ENST00000574911 ELOVL6Q9H5J4 265 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 GPN2Q9H9Y4 310 aaPredicted RBP8.71□□□□□ -1.01
NCBP3-204ENST00000574911 MRPL17Q9NRX2 175 aaKnown RBP8.71□□□□□ -1.01
NCBP3-204ENST00000574911 TMPRSS11EQ9UL52 423 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 ZNF510Q9Y2H8 683 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 TMED5Q9Y3A6 229 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 SCN5AQ14524 2016 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 TET1Q8NFU7 2136 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 CXorf51AA0A1B0GTR3 108 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 MAGEB3O15480 346 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 HS6ST1O60243 411 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 GSNP06396 782 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 C1SP09871 688 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 ITGAMP11215 1152 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 MYCLP1P12525 358 aaPredicted RBP8.71□□□□□ -1.02
NCBP3-204ENST00000574911 MAPK1P28482 360 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 RYKP34925 604 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 CTSOP43234 321 aaPredicted RBP8.71□□□□□ -1.02
NCBP3-204ENST00000574911 HNMTP50135 292 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 TPD52P55327 224 aaPredicted RBP8.71□□□□□ -1.02
NCBP3-204ENST00000574911 SNRPD1P62314 119 aaKnown RBP8.71□□□□□ -1.02
NCBP3-204ENST00000574911 CYP4F8P98187 520 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 PPP1R8Q12972 351 aaKnown RBP8.71□□□□□ -1.02
NCBP3-204ENST00000574911 BNIP3Q12983 259 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 MOGQ16653 247 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 SLC44A4Q53GD3 710 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 CES5AQ6NT32 575 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 USP45Q70EL2 814 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 DCP2Q8IU60 420 aaKnown RBP8.71□□□□□ -1.02
NCBP3-204ENST00000574911 ZC3H7AQ8IWR0 971 aaKnown RBP8.71□□□□□ -1.02
NCBP3-204ENST00000574911 FRS2Q8WU20 508 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 RAB2BQ8WUD1 216 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 MUL1Q969V5 352 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 PPP1R14BQ96C90 147 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 APIPQ96GX9 242 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 TSSK3Q96PN8 268 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 CSF3RQ99062 836 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 GABARAPL1Q9H0R8 117 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 ABCG8Q9H221 673 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 SUV39H2Q9H5I1 410 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 VNN3Q9NY84 501 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 GPRC5BQ9NZH0 403 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 CFAP97Q9P2B7 532 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 MBD1Q9UIS9 605 aaPredicted RBP8.71□□□□□ -1.02
NCBP3-204ENST00000574911 C3orf18Q9UK00 162 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 NAALAD2Q9Y3Q0 740 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 ANKRD12Q6UB98 2062 aa8.71□□□□□ -1.02
NCBP3-204ENST00000574911 HTTP42858 3142 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 SLC16A5O15375 505 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 PRAMEF4O60810 478 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 B3GALT4O96024 378 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 AMD1P17707 334 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 AGXTP21549 392 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 PRKACGP22612 351 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 MAP4P27816 1152 aaKnown RBP8.7□□□□□ -1.02
NCBP3-204ENST00000574911 STK19P49842 368 aaPredicted RBP8.7□□□□□ -1.02
NCBP3-204ENST00000574911 PLA2G16P53816 162 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 SLC7A9P82251 487 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 VAC14Q08AM6 782 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 MTAPQ13126 283 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 IL18R1Q13478 541 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 PGS1Q32NB8 556 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 RFX4Q33E94 735 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 ANKDD1AQ495B1 522 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 PRAMEF9Q5VWM5 478 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 SHQ1Q6PI26 577 aaKnown RBP8.7□□□□□ -1.02
NCBP3-204ENST00000574911 XKR5Q6UX68 686 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 DEFB128Q7Z7B8 93 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 ANKRD46Q86W74 232 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 VRK3Q8IV63 474 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 ARL10Q8N8L6 244 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 ASIC4Q96FT7 647 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 FAIMQ9NVQ4 179 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 TBCCD1Q9NVR7 557 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 BLOC1S6Q9UL45 172 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 PSME2Q9UL46 239 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 SH3BP1Q9Y3L3 701 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 PLXNB3Q9ULL4 1909 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 OBSL1O75147 1896 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 GFYI3L273 518 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 SLC1A7O00341 560 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 PQBP1O60828 265 aaKnown RBP8.7□□□□□ -1.02
NCBP3-204ENST00000574911 CCNDBP1O95273 360 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 HIST1H2AGP0C0S8 130 aaPredicted RBP8.7□□□□□ -1.02
NCBP3-204ENST00000574911 ZNF182P17025 639 aaPredicted RBP8.7□□□□□ -1.02
NCBP3-204ENST00000574911 HIST1H2ADP20671 130 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 MAPK10P53779 464 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 SP140Q13342 867 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 SPIDRQ14159 915 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 DPY19L1Q2PZI1 675 aa8.7□□□□□ -1.02
NCBP3-204ENST00000574911 PTCHD3Q3KNS1 767 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms