RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 FBXO39Q8N4B4 442 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 PPM1NQ8N819 430 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 ANKRD20A12PQ8NF67 263 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 TRIM58Q8NG06 486 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 PIH1D2Q8WWB5 315 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 HTR3CQ8WXA8 447 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 HSPH1Q92598 858 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 KIAA1191Q96A73 305 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 TMEM159Q96B96 161 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 CSPG4P5Q96PW8 444 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 TMEM237Q96Q45 408 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 SMIM14Q96QK8 99 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 GFM1Q96RP9 751 aaKnown RBP6.06□□□□□ -1.44
LINC00556-201ENST00000569603 NUDCD1Q96RS6 583 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 CCNL2Q96S94 520 aaPredicted RBP6.06□□□□□ -1.44
LINC00556-201ENST00000569603 TUBA1CQ9BQE3 449 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 FUCA2Q9BTY2 467 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 TMEM120AQ9BXJ8 343 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 SPRY4Q9C004 299 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.06□□□□□ -1.44
LINC00556-201ENST00000569603 DHX35Q9H5Z1 703 aaKnown RBP6.06□□□□□ -1.44
LINC00556-201ENST00000569603 HAUS4Q9H6D7 363 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 WDR26Q9H7D7 661 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 CCDC177Q9NQR7 707 aaPredicted RBP6.06□□□□□ -1.44
LINC00556-201ENST00000569603 STARD5Q9NSY2 213 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 TRNAU1APQ9NX07 287 aaKnown RBP6.06□□□□□ -1.44
LINC00556-201ENST00000569603 ERVK13-1Q9NX77 482 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 IL1RAPL1Q9NZN1 696 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 GULP1Q9UBP9 304 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 PCDHB14Q9Y5E9 798 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 PCDHGA3Q9Y5H0 932 aa6.06□□□□□ -1.44
LINC00556-201ENST00000569603 PCYT1BQ9Y5K3 369 aaPredicted RBP6.06□□□□□ -1.44
LINC00556-201ENST00000569603 CSMD1Q96PZ7 3565 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 PRAMEF33A0A0G2JMD5 474 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 IGHV5-10-1A0A0J9YXX1 117 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 A0A0U1RQS6 177 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.05□□□□□ -1.44
LINC00556-201ENST00000569603 KRT87PA6NCN2 255 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 EIF4E1BA6NMX2 242 aaKnown RBP6.05□□□□□ -1.44
LINC00556-201ENST00000569603 TMX2-CTNND1H3BSU7 103 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 J3QKU1 62 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 PSMD11O00231 422 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 PRPSAP2O60256 369 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 PRAMEF10O60809 474 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 NOL3O60936 208 aaKnown RBP6.05□□□□□ -1.44
LINC00556-201ENST00000569603 PGLSO95336 258 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 TNFP01375 233 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 IVLP07476 585 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 HEXBP07686 556 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 CELA3BP08861 270 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 ELFN1P0C7U0 828 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 LIPCP11150 499 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 CCNB1P14635 433 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 PAMP19021 973 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 ITIH1P19827 911 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 CD1CP29017 333 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 HSPA9P38646 679 aaKnown RBP6.05□□□□□ -1.44
LINC00556-201ENST00000569603 GPR3P46089 330 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 SCNN1BP51168 640 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 MAZP56270 477 aaKnown RBP6.05□□□□□ -1.44
LINC00556-201ENST00000569603 POLR2LP62875 67 aaKnown RBP6.05□□□□□ -1.44
LINC00556-201ENST00000569603 CD83Q01151 205 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 BCL2L1Q07817 233 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 ADCY2Q08462 1091 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 KIF5AQ12840 1032 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 SEMA5AQ13591 1074 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 NR1I3Q14994 352 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 IQCB1Q15051 598 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 ZNF674Q2M3X9 581 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 PPP6R3Q5H9R7 873 aaPredicted RBP6.05□□□□□ -1.44
LINC00556-201ENST00000569603 FIGNQ5HY92 759 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 BROXQ5VW32 411 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 GALNT18Q6P9A2 607 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 Q6ZVL8 140 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 RD3Q7Z3Z2 195 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 TSPAN33Q86UF1 283 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 SPATA24Q86W54 205 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 LSRQ86X29 649 aaPredicted RBP6.05□□□□□ -1.44
LINC00556-201ENST00000569603 PTRH1Q86Y79 214 aaKnown RBP6.05□□□□□ -1.44
LINC00556-201ENST00000569603 CPNE8Q86YQ8 564 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 CEP97Q8IW35 865 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 NAGSQ8N159 534 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 PRR18Q8N4B5 295 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 LZTR1Q8N653 840 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 AOPEPQ8N6M6 819 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 TMCO5AQ8N6Q1 288 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 BMPERQ8N8U9 685 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 FAM46DQ8NEK8 389 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 OR2W6PQ8NHA6 318 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 RFWD2Q8NHY2 731 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 ARRDC2Q8TBH0 407 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 FAM216AQ8WUB2 273 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 ZFAND2BQ8WV99 257 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 PATE1Q8WXA2 126 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 FAF2Q96CS3 445 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 NUS1Q96E22 293 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 SCRN2Q96FV2 425 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 COX14Q96I36 57 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 WDR24Q96S15 920 aa6.05□□□□□ -1.44
LINC00556-201ENST00000569603 SEMA3CQ99985 751 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms