RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 MAP4P27816 1152 aaKnown RBP12.54□□□□□ -0.4
CNOT1-213ENST00000568158 GP5P40197 560 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 GRIA3P42263 894 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 PNLIPRP1P54315 467 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 TUBB3Q13509 450 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 TSTA3Q13630 321 aaPredicted RBP12.54□□□□□ -0.4
CNOT1-213ENST00000568158 GRTP1Q5TC63 336 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 PRAMEF17Q5VTA0 474 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 KIAA1614Q5VZ46 1190 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 PWWP2BQ6NUJ5 590 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 FIGLAQ6QHK4 219 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 CDHR3Q6ZTQ4 885 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 PPP1R3BQ86XI6 285 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 RELL1Q8IUW5 271 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 MYO1HQ8N1T3 1032 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 RAB42Q8N4Z0 105 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 FBXO15Q8NCQ5 510 aaPredicted RBP12.54□□□□□ -0.4
CNOT1-213ENST00000568158 UHMK1Q8TAS1 419 aaKnown RBP12.54□□□□□ -0.4
CNOT1-213ENST00000568158 HMGCLL1Q8TB92 370 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 MCOLN3Q8TDD5 553 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 ZNF480Q8WV37 535 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 ANKRD49Q8WVL7 239 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 NKD1Q969G9 470 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 SLC22A18Q96BI1 424 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 ZNF501Q96CX3 271 aaPredicted RBP12.54□□□□□ -0.4
CNOT1-213ENST00000568158 TEFMQ96QE5 360 aaKnown RBP12.54□□□□□ -0.4
CNOT1-213ENST00000568158 RBBP8Q99708 897 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 MIPEPQ99797 713 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 ZPBPQ9BS86 351 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 RAB11FIP5Q9BXF6 653 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 CDC42EP4Q9H3Q1 356 aaKnown RBP12.54□□□□□ -0.4
CNOT1-213ENST00000568158 ABCF3Q9NUQ8 709 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 SPATA7Q9P0W8 599 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 TXNDC16Q9P2K2 825 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 PILRAQ9UKJ1 303 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 PDE10AQ9Y233 779 aa12.54□□□□□ -0.4
CNOT1-213ENST00000568158 ESPNB1AK53 854 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 STMND1H3BQB6 276 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 RAD1O60671 282 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 STK17BO94768 372 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 KIAA0754O94854 1291 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 ACSL3O95573 720 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 SLC16A8O95907 504 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 NTRK1P04629 796 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 CTSBP07858 339 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 FAM153BP0C7A2 387 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 LIPCP11150 499 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 ERGP11308 486 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 MAGP20916 626 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 CD82P27701 267 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 STX2P32856 288 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 SPRP35270 261 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-213ENST00000568158 GMPRP36959 345 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 SLC12A2P55011 1212 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 TUBB4BP68371 445 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 POU4F1Q01851 419 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 TLE3Q04726 772 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 COL9A2Q14055 689 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-213ENST00000568158 USP10Q14694 798 aaKnown RBP12.53□□□□□ -0.4
CNOT1-213ENST00000568158 PHKG1Q16816 387 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 COL28A1Q2UY09 1125 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 FAM153CQ494X1 144 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 TEX35Q5T0J7 233 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 FCRL6Q6DN72 434 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 LRRC8EQ6NSJ5 796 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 MBOAT1Q6ZNC8 495 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 CEP128Q6ZU80 1094 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 SPATA6LQ8N4H0 392 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 DNAJC22Q8N4W6 341 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 C19orf47Q8N9M1 422 aaKnown RBP12.53□□□□□ -0.4
CNOT1-213ENST00000568158 OR2A1Q8NGT9 310 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 OR1L3Q8NH93 324 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 TCTN2Q96GX1 697 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 PDLIM5Q96HC4 596 aaKnown RBP12.53□□□□□ -0.4
CNOT1-213ENST00000568158 ACAT2Q9BWD1 397 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 SLC12A9Q9BXP2 914 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 TSPYL1Q9H0U9 437 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 AKIRIN1Q9H9L7 192 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-213ENST00000568158 PARVBQ9HBI1 364 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 SYTL2Q9HCH5 934 aa12.53□□□□□ -0.4
CNOT1-213ENST00000568158 TMEM184BQ9Y519 407 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-213ENST00000568158 AHCTF1Q8WYP5 2266 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 TMEM150CB9EJG8 249 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.52□□□□□ -0.41
CNOT1-213ENST00000568158 E7ENX8 843 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 CDC7O00311 574 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 SLC16A5O15375 505 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 PHGDHO43175 533 aaKnown RBP12.52□□□□□ -0.41
CNOT1-213ENST00000568158 MAP3K7O43318 606 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 KRT37O76014 449 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 DLGAP3O95886 979 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 C8GP07360 202 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 CYP2A7P20853 494 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 IMPA1P29218 277 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 PHBP35232 272 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 GABRA4P48169 554 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 TAP2Q03519 686 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 ARHGAP19Q14CB8 494 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 DEFB110Q30KQ9 67 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms