RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 RAD51AP1Q96B01 352 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 FOPNLQ96NB1 174 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 BIRC8Q96P09 236 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 SERPINB12Q96P63 405 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 OSBPL9Q96SU4 736 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 RUFY1Q96T51 708 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 DHRS4Q9BTZ2 278 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 CLMPQ9H6B4 373 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 GRPEL1Q9HAV7 217 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 XAB2Q9HCS7 855 aaKnown RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 PRM3Q9NNZ6 103 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 FAM60AQ9NP50 221 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 ZNF71Q9NQZ8 489 aaPredicted RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 INTS7Q9NVH2 962 aaKnown RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 INTS10Q9NVR2 710 aaKnown RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 KLHL42Q9P2K6 505 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 TCFL5Q9UL49 500 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 SLC39A10Q9ULF5 831 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 SNX7Q9UNH6 387 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 SRPK3Q9UPE1 567 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 PLCL2Q9UPR0 1127 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 TP53TG5Q9Y2B4 290 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 PADI2Q9Y2J8 665 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 NEU2Q9Y3R4 380 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 PRRC2CQ9Y520 2896 aaKnown RBP4.61□□□□□ -1.67
CLK3-219ENST00000567805 SEC16AO15027 2179 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 MED13Q9UHV7 2174 aa4.61□□□□□ -1.67
CLK3-219ENST00000567805 PCSK5Q92824 1860 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 CTAGE9A4FU28 777 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 TARM1B6A8C7 271 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 E5RI56 91 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 RNF223E7ERA6 249 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 GOLGA8MH3BSY2 632 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 HCRTR1O43613 425 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 PRICKLE3O43900 615 aaPredicted RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 KIF5CO60282 957 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 NIPSNAP2O75323 286 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 KLF7O75840 302 aaPredicted RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 DNAJB5O75953 348 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 WFS1O76024 890 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 USP1O94782 785 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 MATN4O95460 622 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 PKMP14618 531 aaKnown RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 CHRM3P20309 590 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 MAGP20916 626 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 FMO4P31512 558 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 PTGIRP43119 386 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 MAGEA3P43357 314 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 PGDP52209 483 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 TERF1P54274 439 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 ARSFP54793 590 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 RRADP55042 308 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 DCDP81605 110 aaKnown RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 TLE1Q04724 770 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 KLRB1Q12918 225 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 THOC5Q13769 683 aaKnown RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 DHX34Q14147 1143 aaKnown RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 SSPNQ14714 243 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 ARHGAP19Q14CB8 494 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 NAA25Q14CX7 972 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 PPP1R7Q15435 360 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 SF1Q15637 639 aaKnown RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 KCTD19Q17RG1 926 aaPredicted RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 PTCHD3Q3KNS1 767 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 ZC3H12BQ5HYM0 836 aaKnown RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 TCTE1Q5JU00 501 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 YOD1Q5VVQ6 348 aaPredicted RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 CPZQ66K79 652 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 ZNF470Q6ECI4 717 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 CNSTQ6PJW8 725 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 FIGLAQ6QHK4 219 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 ASB18Q6ZVZ8 466 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 NEK10Q6ZWH5 1172 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 CENPUQ71F23 418 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 MED25Q71SY5 747 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 PCGF5Q86SE9 256 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 RAB43Q86YS6 212 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 MCATQ8IVS2 390 aaKnown RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 LMNTD2Q8IXW0 634 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 PPIL6Q8IXY8 311 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 C2orf73Q8N5S3 287 aaPredicted RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 ZBTB2Q8N680 514 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 ZNF655Q8N720 491 aaPredicted RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 NAT8LQ8N9F0 302 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 TMEM102Q8N9M5 508 aaPredicted RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 LMNTD1Q8N9Z9 388 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 TEX19Q8NA77 164 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 CALML6Q8TD86 181 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 ADAMTS17Q8TE56 1095 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 COG1Q8WTW3 980 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 DLG3Q92796 817 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 KCNJ9Q92806 393 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 SLCO2A1Q92959 643 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 ZUFSPQ96AP4 578 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 ZNF669Q96BR6 464 aaPredicted RBP4.6□□□□□ -1.67
CLK3-219ENST00000567805 IP6K3Q96PC2 410 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 GBP5Q96PP8 586 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 SELENOSQ9BQE4 189 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 NDC1Q9BTX1 674 aa4.6□□□□□ -1.67
CLK3-219ENST00000567805 TRIM55Q9BYV6 548 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms