RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 UBE2R2Q712K3 238 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-206ENST00000565990 EFL1Q7Z2Z2 1120 aaKnown RBP12.24□□□□□ -0.45
SF3B3-206ENST00000565990 DCUN1D3Q8IWE4 304 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 COL27A1Q8IZC6 1860 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-206ENST00000565990 SPATA6LQ8N4H0 392 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 BANPQ8N9N5 519 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 OR52E1Q8NGJ3 308 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 OR9A1PQ8NGU1 263 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 HMGCLL1Q8TB92 370 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 STAG3L4Q8TBR4 150 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 IFI44Q8TCB0 444 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 MCOLN3Q8TDD5 553 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 SKA2Q8WVK7 121 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-206ENST00000565990 ZNF75CPQ92670 426 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-206ENST00000565990 CCDC74AQ96AQ1 378 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 PTERQ96BW5 349 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 APOPT1Q96IL0 206 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 CCDC138Q96M89 665 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 EPB41L1Q9H4G0 881 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 DLL3Q9NYJ7 618 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 IGHV1OR21-1A0A087WYE8 117 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 FAM221BA6H8Z2 402 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 TARM1B6A8C7 271 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 NTN3O00634 580 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-206ENST00000565990 KDM1AO60341 852 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 HIST1H2AGP0C0S8 130 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-206ENST00000565990 PYGBP11216 843 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 HIST1H2ADP20671 130 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 MAP4P27816 1152 aaKnown RBP12.23□□□□□ -0.45
SF3B3-206ENST00000565990 AP1S2P56377 157 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 OR1D5P58170 312 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 GPLD1P80108 840 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 E2F1Q01094 437 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 CFHR1Q03591 330 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 OR4D1Q15615 310 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 CYP2A13Q16696 494 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 ZXDCQ2QGD7 858 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-206ENST00000565990 WDR74Q6RFH5 385 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-206ENST00000565990 SPRED1Q7Z699 444 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 AMIGO1Q86WK6 493 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 DEFB124Q8NES8 71 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 OR4E2Q8NGC2 313 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 KCTD4Q8WVF5 259 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 LCN9Q8WX39 176 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 HIST1H2AHQ96KK5 128 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 PKP4Q99569 1192 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 HIST1H2AJQ99878 128 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 CCDC3Q9BQI4 270 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 SIKE1Q9BRV8 207 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 H2AFJQ9BTM1 129 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 TBC1D10AQ9BXI6 508 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 TRIM55Q9BYV6 548 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 OR6C2Q9NZP2 312 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 PDP2Q9P2J9 529 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 CDV3Q9UKY7 258 aaKnown RBP12.23□□□□□ -0.45
SF3B3-206ENST00000565990 ICKQ9UPZ9 632 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 C15orf41Q9Y2V0 281 aa12.23□□□□□ -0.45
SF3B3-206ENST00000565990 CEP250Q9BV73 2442 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 A0A1W2PQM1 296 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 BTN3A3O00478 584 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 BTN3A1O00481 513 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 PRICKLE3O43900 615 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-206ENST00000565990 UBXN7O94888 489 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 MTHFD2P13995 350 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 KRT4P19013 534 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 TFEBP19484 476 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 CYP2A7P20853 494 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 PTPN4P29074 926 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 SHMT2P34897 504 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 CRHR1P34998 444 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 RPA3P35244 121 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-206ENST00000565990 RAB28P51157 221 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 CCL7P80098 99 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 KRT72Q14CN4 511 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 TSNQ15631 228 aaKnown RBP12.22□□□□□ -0.45
SF3B3-206ENST00000565990 TSNAXIP1Q2TAA8 658 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 TLDC1Q6P9B6 456 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 ADAMTSL2Q86TH1 951 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 SLCO6A1Q86UG4 719 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 APLFQ8IW19 511 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-206ENST00000565990 LRRC56Q8IYG6 542 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-206ENST00000565990 ADGRF3Q8IZF5 1079 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 OR2L8Q8NGY9 312 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 WDR48Q8TAF3 677 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 ATOH8Q96SQ7 321 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 NRTNQ99748 197 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 HGH1Q9BTY7 390 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 TRIM54Q9BYV2 358 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 MMADHCQ9H3L0 296 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-206ENST00000565990 LRRN3Q9H3W5 708 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 SRMSQ9H3Y6 488 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 ZNF358Q9NW07 568 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 KCNK4Q9NYG8 393 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 SPATA7Q9P0W8 599 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 EPHA6Q9UF33 1036 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 TDRKHQ9Y2W6 561 aaKnown RBP12.22□□□□□ -0.45
SF3B3-206ENST00000565990 OARD1Q9Y530 152 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 PIEZO1Q92508 2521 aa12.22□□□□□ -0.45
SF3B3-206ENST00000565990 OR5K3A6NET4 321 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 VGLL3A8MV65 326 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms