RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 PCOLCE2Q9UKZ9 415 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 SLC6A14Q9UN76 642 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 TDRKHQ9Y2W6 561 aaKnown RBP10.77□□□□□ -0.69
SF3B3-205ENST00000564899 TNPO3Q9Y5L0 923 aaKnown RBP10.77□□□□□ -0.69
SF3B3-205ENST00000564899 HEBP2Q9Y5Z4 205 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 HECTD1Q9ULT8 2610 aa10.77□□□□□ -0.69
SF3B3-205ENST00000564899 GMNCA6NCL1 334 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 ITM2AO43736 263 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 SNNO75324 88 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-205ENST00000564899 LYPLA1O75608 230 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-205ENST00000564899 HSPA4LO95757 839 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 F3P13726 295 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 SLC2A4P14672 509 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 HOXD12P35452 270 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 SERPINB5P36952 375 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 CCR10P46092 362 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 SLC1A6P48664 564 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 HSPA7P48741 367 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 SEC24CP53992 1094 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 NAA20P61599 178 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 OCRLQ01968 901 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 PRKG2Q13237 762 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 PCBP2Q15366 365 aaKnown RBP eCLIP10.76□□□□□ -0.69
SF3B3-205ENST00000564899 TRIP6Q15654 476 aaKnown RBP10.76□□□□□ -0.69
SF3B3-205ENST00000564899 FRMD7Q6ZUT3 714 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 RABEPKQ7Z6M1 372 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 GKN2Q86XP6 184 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 ZNF548Q8NEK5 533 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-205ENST00000564899 ZNF483Q8TF39 744 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-205ENST00000564899 ADAMTS14Q8WXS8 1223 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 CXorf40BQ96DE9 158 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 MOCOSQ96EN8 888 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 CNDP1Q96KN2 507 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 C7orf26Q96N11 449 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 ZNF317Q96PQ6 595 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-205ENST00000564899 TRMOQ9BU70 441 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 C1QTNF3Q9BXJ4 246 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 CD244Q9BZW8 370 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 DRC3Q9H069 523 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 GSTO2Q9H4Y5 243 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 CCDC86Q9H6F5 360 aaKnown RBP10.76□□□□□ -0.69
SF3B3-205ENST00000564899 IL21RQ9HBE5 538 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 FGFR1OP2Q9NVK5 253 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 SPATA7Q9P0W8 599 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 STOX2Q9P2F5 926 aaPredicted RBP10.76□□□□□ -0.69
SF3B3-205ENST00000564899 PCTPQ9UKL6 214 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 PLAGL1Q9UM63 463 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 DOLKQ9UPQ8 538 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 ASB1Q9Y576 335 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 SNX11Q9Y5W9 270 aa10.76□□□□□ -0.69
SF3B3-205ENST00000564899 B4DGG1 531 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 K7EPI3 171 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 ARHGAP33O14559 1287 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 AQP9O43315 295 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 CCNT2O60583 730 aaKnown RBP10.75□□□□□ -0.69
SF3B3-205ENST00000564899 EDF1O60869 148 aaKnown RBP10.75□□□□□ -0.69
SF3B3-205ENST00000564899 SDC3O75056 442 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 CBFA2T3O75081 653 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 STK16O75716 305 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 PIAS2O75928 621 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 SLC16A8O95907 504 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 NDUFS1P28331 727 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 IMPA1P29218 277 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 ARRB2P32121 409 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 SLC6A12P48065 614 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 ARRB1P49407 418 aaPredicted RBP10.75□□□□□ -0.69
SF3B3-205ENST00000564899 ATXN3P54252 364 aaPredicted RBP10.75□□□□□ -0.69
SF3B3-205ENST00000564899 CDH13P55290 713 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 BNC1Q01954 994 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 CLCQ05315 142 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 GRIK2Q13002 908 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 GRB7Q14451 532 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 DUOXA1Q1HG43 343 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 ZNF423Q2M1K9 1284 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 ARL13AQ5H913 290 aaPredicted RBP10.75□□□□□ -0.69
SF3B3-205ENST00000564899 METTL2BQ6P1Q9 378 aaKnown RBP10.75□□□□□ -0.69
SF3B3-205ENST00000564899 AGTRAPQ6RW13 159 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 RPS27LQ71UM5 84 aaKnown RBP10.75□□□□□ -0.69
SF3B3-205ENST00000564899 LRRC70Q7Z2Q7 622 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 GOLGA7Q7Z5G4 137 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 CRLF3Q8IUI8 442 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 NAXDQ8IW45 347 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 TRIM48Q8IWZ4 208 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 SYTL1Q8IYJ3 562 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 RAB42Q8N4Z0 105 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 TEX9Q8N6V9 391 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 FAM46DQ8NEK8 389 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 CEP76Q8TAP6 659 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 ZNF480Q8WV37 535 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 NSUN5Q96P11 429 aaKnown RBP10.75□□□□□ -0.69
SF3B3-205ENST00000564899 ELF4Q99607 663 aaPredicted RBP10.75□□□□□ -0.69
SF3B3-205ENST00000564899 PITPNM3Q9BZ71 974 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 C20orf27Q9GZN8 174 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 FAM107BQ9H098 131 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 NSRP1Q9H0G5 558 aaKnown RBP10.75□□□□□ -0.69
SF3B3-205ENST00000564899 ATG10Q9H0Y0 220 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 EPN3Q9H201 632 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 RABEP2Q9H5N1 569 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 ZNF395Q9H8N7 513 aaPredicted RBP10.75□□□□□ -0.69
SF3B3-205ENST00000564899 EML4Q9HC35 981 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms