RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 C21orf59P57076 290 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 SGCGQ13326 291 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 BCL7AQ4VC05 210 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 RFPL4BQ6ZWI9 263 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 FAM124AQ86V42 546 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 EBF4Q9BQW3 602 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 HAUS8Q9BT25 410 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 SLC17A9Q9BYT1 436 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 EML4Q9HC35 981 aaKnown RBP17.25■□□□□ 0.35
GDE1-203ENST00000564172 NUDT4Q9NZJ9 180 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 HEY2Q9UBP5 337 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 RAB26Q9ULW5 256 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 OARD1Q9Y530 152 aa17.25■□□□□ 0.35
GDE1-203ENST00000564172 FFAR2O15552 330 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 VEGFDO43915 354 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 LILRB5O75023 590 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 SLCO2B1O94956 709 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 EEF1DP29692 281 aaKnown RBP17.24■□□□□ 0.35
GDE1-203ENST00000564172 AGTR2P50052 363 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 AQP4P55087 323 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 CDK3Q00526 305 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 PRKCQQ04759 706 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 INPP5AQ14642 412 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 HORMAD1Q86X24 394 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 ADHFE1Q8IWW8 467 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 TP53I13Q8NBR0 393 aaPredicted RBP17.24■□□□□ 0.35
GDE1-203ENST00000564172 LGR4Q9BXB1 951 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 C1QTNF3Q9BXJ4 246 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 C12orf10Q9HB07 376 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 GULP1Q9UBP9 304 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 FAM8A1Q9UBU6 413 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 SORCS3Q9UPU3 1222 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 RAD51BO15315 384 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 S100BP04271 92 aaPredicted RBP17.24■□□□□ 0.35
GDE1-203ENST00000564172 MPC1LP0DKB6 136 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 ZNF8P17098 575 aaPredicted RBP17.24■□□□□ 0.35
GDE1-203ENST00000564172 TSPAN8P19075 237 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 M6PRP20645 277 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 TCEA1P23193 301 aaKnown RBP17.24■□□□□ 0.35
GDE1-203ENST00000564172 TRIM23P36406 574 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 IRF4Q15306 451 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 ANKS6Q68DC2 871 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 NEK5Q6P3R8 708 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 TRAPPC5Q8IUR0 188 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 FLCNQ8NFG4 579 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 ZNF514Q96K75 400 aaPredicted RBP17.24■□□□□ 0.35
GDE1-203ENST00000564172 NUF2Q9BZD4 464 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 WWP1Q9H0M0 922 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 COG4Q9H9E3 785 aa17.24■□□□□ 0.35
GDE1-203ENST00000564172 ANKRD12Q6UB98 2062 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 UBFD1O14562 309 aaKnown RBP17.23■□□□□ 0.35
GDE1-203ENST00000564172 RPS17P08708 135 aaKnown RBP17.23■□□□□ 0.35
GDE1-203ENST00000564172 TPMTP51580 245 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 GTF2H3Q13889 308 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 RGS21Q2M5E4 152 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 CUZD1Q86UP6 607 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 ZNF547Q8IVP9 402 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 LILRA3Q8N6C8 439 aaPredicted RBP17.23■□□□□ 0.35
GDE1-203ENST00000564172 PDPRQ8NCN5 879 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 ANGPTL6Q8NI99 470 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 SKA2Q8WVK7 121 aaPredicted RBP17.23■□□□□ 0.35
GDE1-203ENST00000564172 ASB11Q8WXH4 323 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 ESAMQ96AP7 390 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 TMEM159Q96B96 161 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 NSUN5Q96P11 429 aaKnown RBP17.23■□□□□ 0.35
GDE1-203ENST00000564172 TEX101Q9BY14 249 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 STN1Q9H668 368 aaKnown RBP17.23■□□□□ 0.35
GDE1-203ENST00000564172 ARMC7Q9H6L4 198 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 LMAN1LQ9HAT1 526 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 RDH14Q9HBH5 336 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 AASDHPPTQ9NRN7 309 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 GPR34Q9UPC5 381 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 DOCK9Q9BZ29 2069 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 SLC5A10A0PJK1 596 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 KRBA1A5PL33 1030 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 PPP6CO00743 305 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 GUCA1CO95843 209 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 ABCB1P08183 1280 aaPredicted RBP17.23■□□□□ 0.35
GDE1-203ENST00000564172 THRAP10827 490 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 ZNF23P17027 643 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 TEAD1P28347 426 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 MAT2AP31153 395 aaKnown RBP17.23■□□□□ 0.35
GDE1-203ENST00000564172 HK2P52789 917 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 ZP2Q05996 745 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 DNAL1Q4LDG9 190 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 ZNF658BQ4V348 819 aaPredicted RBP17.23■□□□□ 0.35
GDE1-203ENST00000564172 VWA5B1Q5TIE3 1220 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 LSMEM1Q8N8F7 131 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 MAPK15Q8TD08 544 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 ACTRT2Q8TDY3 377 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 HMGB4Q8WW32 186 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 LINC00615Q96LM1 132 aaPredicted RBP17.23■□□□□ 0.35
GDE1-203ENST00000564172 PAIP1Q9H074 479 aaKnown RBP17.23■□□□□ 0.35
GDE1-203ENST00000564172 MOV10Q9HCE1 1003 aaKnown RBP17.23■□□□□ 0.35
GDE1-203ENST00000564172 TNFRSF12AQ9NP84 129 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 ARMC1Q9NVT9 282 aa17.23■□□□□ 0.35
GDE1-203ENST00000564172 CDK2AP1O14519 115 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 SLC22A1O15245 554 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 HDAC3O15379 428 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 GRID2O43424 1007 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms