RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 ZNF461Q8TAF7 563 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 SLC22A17Q8WUG5 538 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 PIH1D2Q8WWB5 315 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 FIG4Q92562 907 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 RHBDF1Q96CC6 855 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 FAM120BQ96EK7 910 aaKnown RBP7.31□□□□□ -1.24
CFDP1-202ENST00000562602 PYURFQ96I23 114 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 FBXL20Q96IG2 436 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 HHIPL1Q96JK4 782 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 COX4I2Q96KJ9 171 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 TMEM74Q96NL1 305 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 MUS81Q96NY9 551 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 OR52E6Q96RD3 313 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 ZIC5Q96T25 663 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 APOL4Q9BPW4 351 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 EMILIN2Q9BXX0 1053 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 ASPSCR1Q9BZE9 553 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 WDR12Q9GZL7 423 aaKnown RBP7.31□□□□□ -1.24
CFDP1-202ENST00000562602 GABARAPL1Q9H0R8 117 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 ADNPQ9H2P0 1102 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 TRIT1Q9H3H1 467 aaKnown RBP7.31□□□□□ -1.24
CFDP1-202ENST00000562602 RAD21L1Q9H4I0 556 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 KAT8Q9H7Z6 458 aaKnown RBP7.31□□□□□ -1.24
CFDP1-202ENST00000562602 NTN4Q9HB63 628 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 PARVBQ9HBI1 364 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 STARD7Q9NQZ5 370 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 SCN3BQ9NY72 215 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 ZDHHC3Q9NYG2 299 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 EBF1Q9UH73 591 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 ITGB1BP2Q9UKP3 347 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 ZNF490Q9ULM2 529 aaPredicted RBP7.31□□□□□ -1.24
CFDP1-202ENST00000562602 PPIL1Q9Y3C6 166 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 MYO16Q9Y6X6 1858 aa7.31□□□□□ -1.24
CFDP1-202ENST00000562602 TRBV5-3A0A0A0MS03 114 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 C1orf232A0A0U1RR37 186 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 A0A1B0GTL3 188 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 LOC100130705A0A1B0GUX0 176 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 AGAP14A8MT82 685 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 KPNA4O00629 521 aaPredicted RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 SLC22A1O15245 554 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 TAPBPO15533 448 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 TBL1XO60907 577 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 E2F6O75461 281 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 CREG1O75629 220 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 GJB3O75712 270 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 CLPXO76031 633 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 MYO1DO94832 1006 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 ABLIM3O94929 683 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 AP2A2O94973 939 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 TRIM16O95361 564 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 VNN2O95498 520 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 KLKB1P03952 638 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 NTRK1P04629 796 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 CNPP09543 421 aaKnown RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 PRSS56P0CW18 603 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 EPXP11678 715 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 HMGA1P17096 107 aaKnown RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 CTPS1P17812 591 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 NELFEP18615 380 aaKnown RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 UGT1A6P19224 532 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 CYP2A7P20853 494 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 PRPS1L1P21108 318 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 PTX3P26022 381 aaPredicted RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 CCND3P30281 292 aaPredicted RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 GRK3P35626 688 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 MAGEA2P43356 314 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 HSPA7P48741 367 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 CDKN1CP49918 316 aaPredicted RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 CCR3P51677 355 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 PNLIPRP1P54315 467 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 EPHB3P54753 998 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 C21orf58P58505 322 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 MTPNP58546 118 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 RPS14P62263 151 aaKnown RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 SNRPD1P62314 119 aaKnown RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 POLR2LP62875 67 aaKnown RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 PRKCZQ05513 592 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 SFSWAPQ12872 951 aaKnown RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 NFATC3Q12968 1075 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 CSTF3Q12996 717 aaKnown RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 MBTPS1Q14703 1052 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 ZNF846Q147U1 533 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 FAM174BQ3ZCQ3 159 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 MPPE1Q53F39 396 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 USP39Q53GS9 565 aaKnown RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 PLEKHS1Q5SXH7 462 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 SHQ1Q6PI26 577 aaKnown RBP7.3□□□□□ -1.24
CFDP1-202ENST00000562602 SCIMPQ6UWF3 145 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 TPRG1Q6ZUI0 275 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 TMEM26Q6ZUK4 368 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 USP45Q70EL2 814 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 ANKRD13BQ86YJ7 626 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 FAM217AQ8IXS0 508 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 NXPE1Q8N323 547 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 CPXM2Q8N436 756 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 LIX1Q8N485 282 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 L3MBTL4Q8NA19 623 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 VPS37AQ8NEZ2 397 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 OR10A6Q8NH74 314 aa7.3□□□□□ -1.24
CFDP1-202ENST00000562602 TBC1D15Q8TC07 691 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms