RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PCDHGB2Q9Y5G2 931 aa5.84□□□□□ -1.47
SNRPA1-209ENST00000560307 COL1A2P08123 1366 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 COL4A4P53420 1690 aaPredicted RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 THSD7AQ9UPZ6 1657 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 TRBV23OR9-2A0A075B6M9 112 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 FAM234BA2RU67 622 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 OR2A25A4D2G3 310 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 WASH4PA8MWX3 477 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 EFCAB9A8MZ26 197 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 BCKDKO14874 412 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 AZIN1O14977 448 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 BET1O15155 118 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 CD3EAPO15446 510 aaKnown RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 TEX28O15482 410 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 RGS10O43665 173 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 INMTO95050 263 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 IL33O95760 270 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 ANGPTL1O95841 491 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 AHSGP02765 367 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 ASNSP08243 561 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 GOT1P17174 413 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 HDCP19113 662 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 POLR2CP19387 275 aaPredicted RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 CYP3A5P20815 502 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 PRKACBP22694 351 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 HMGB2P26583 209 aaKnown RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 S100A5P33763 92 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 TGFBR2P37173 567 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 BCL6P41182 706 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 MAGEA11P43364 429 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 HUNKP57058 714 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 OR2B6P58173 313 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 ERVK-21P61565 698 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 GALK2Q01415 458 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 SCAPQ12770 1279 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 IKZF1Q13422 519 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 GPR50Q13585 617 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 MAPK11Q15759 364 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 MEP1AQ16819 746 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 PPP1R3AQ16821 1122 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 IMPG1Q17R60 797 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 C5orf22Q49AR2 442 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 CYP27C1Q4G0S4 372 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 FBXO43Q4G163 708 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 RAB6CQ53S08 254 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 CATSPEREQ5SY80 951 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 RBM20Q5T481 1227 aaKnown RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 FAM160B1Q5W0V3 765 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 GLYATQ6IB77 296 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 TWF2Q6IBS0 349 aaKnown RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 LAIR2Q6ISS4 152 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 CAPN13Q6MZZ7 669 aaPredicted RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 ZNF280DQ6N043 979 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 CXorf57Q6NSI4 855 aaKnown RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 TBPL2Q6SJ96 375 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 CES3Q6UWW8 571 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 CYHR1Q6ZMK1 362 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 RFPL4BQ6ZWI9 263 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 C16orf59Q7L2K0 433 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 PAGE2Q7Z2X7 111 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 STK32CQ86UX6 486 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 PIGZQ86VD9 579 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 UNC93AQ86WB7 457 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 GRAMD2AQ8IUY3 354 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 ADHFE1Q8IWW8 467 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 CBARPQ8N350 705 aaPredicted RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 METTL4Q8N3J2 472 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 FBXL6Q8N531 539 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 ESX1Q8N693 406 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 ACVR1CQ8NER5 493 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 OR9I1Q8NGQ6 314 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 ITFG1Q8TB96 612 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 UBA3Q8TBC4 463 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 MCOLN3Q8TDD5 553 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 NSUN6Q8TEA1 469 aaKnown RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 HEXDCQ8WVB3 486 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 TWIST2Q8WVJ9 160 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 HTRA1Q92743 480 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 TMEM143Q96AN5 459 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 ATXN7L3BQ96GX2 97 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 PDLIM5Q96HC4 596 aaKnown RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 PIWIL1Q96J94 861 aaKnown RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 RNF170Q96K19 258 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 HSFY1Q96LI6 401 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 SIGLEC11Q96RL6 698 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 CAMKK2Q96RR4 588 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 LGMNQ99538 433 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 SLC39A3Q9BRY0 314 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 ITPAQ9BY32 194 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 NFKBIZQ9BYH8 718 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 GPR62Q9BZJ7 368 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 AMBRA1Q9C0C7 1298 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 RAB6CQ9H0N0 254 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 DCSTAMPQ9H295 470 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 NIPAL2Q9H841 368 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 CHST12Q9NRB3 414 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 ABCB10Q9NRK6 738 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 ACOXLQ9NUZ1 547 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 SMPD4Q9NXE4 827 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 CBLCQ9ULV8 474 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms