RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 UGT3A2Q3SY77 523 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 KANK2Q63ZY3 851 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 LETMD1Q6P1Q0 360 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 MILR1Q7Z6M3 343 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 LRRC56Q8IYG6 542 aaPredicted RBP10.89□□□□□ -0.67
USP3-218ENST00000560202 DCBLD1Q8N8Z6 715 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 OR4F6Q8NGB9 312 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 CAMK1GQ96NX5 476 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 IL17FQ96PD4 163 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 NTMT1Q9BV86 223 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 NUF2Q9BZD4 464 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 SPATA7Q9P0W8 599 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 POLG2Q9UHN1 485 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 LNPEPQ9UIQ6 1025 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 APOBEC2Q9Y235 224 aaKnown RBP10.89□□□□□ -0.67
USP3-218ENST00000560202 COLEC10Q9Y6Z7 277 aa10.89□□□□□ -0.67
USP3-218ENST00000560202 TRPC5OSA6NMA1 111 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 GPR37L1O60883 481 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 SKAP2O75563 359 aaPredicted RBP10.88□□□□□ -0.67
USP3-218ENST00000560202 JUNP05412 331 aaKnown RBP10.88□□□□□ -0.67
USP3-218ENST00000560202 CELA2BP08218 269 aaPredicted RBP10.88□□□□□ -0.67
USP3-218ENST00000560202 EBLN1P0CF75 366 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 UROSP10746 265 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 ERGP11308 486 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 C21orf59P57076 290 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 TBPL1P62380 186 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 BTKQ06187 659 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 CDC16Q13042 620 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 C1orf61Q13536 156 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 FASTKQ14296 549 aaKnown RBP10.88□□□□□ -0.67
USP3-218ENST00000560202 CYP2A13Q16696 494 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 SLC9B1Q4ZJI4 515 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 PRRT3Q5FWE3 981 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 FAM219BQ5XKK7 198 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 CAPN13Q6MZZ7 669 aaPredicted RBP10.88□□□□□ -0.67
USP3-218ENST00000560202 TAF8Q7Z7C8 310 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 RAB42Q8N4Z0 105 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 CDYL2Q8N8U2 506 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 LMNTD1Q8N9Z9 388 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 PPP1R36Q96LQ0 422 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 RILPQ96NA2 401 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 MENTQ9BUN1 341 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 LRRC61Q9BV99 259 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 SGPP1Q9BX95 441 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 TAAR2Q9P1P5 351 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 ZNF624Q9P2J8 865 aaPredicted RBP10.88□□□□□ -0.67
USP3-218ENST00000560202 HEY2Q9UBP5 337 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 TIMM22Q9Y584 194 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 DNAJC15Q9Y5T4 150 aa10.88□□□□□ -0.67
USP3-218ENST00000560202 EML5Q05BV3 1969 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 TRBV23OR9-2A0A075B6M9 112 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 PRAMEF33A0A0G2JMD5 474 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 ZNF839A8K0R7 811 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 CLDN9O95484 217 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 ENO1P06733 434 aaKnown RBP10.87□□□□□ -0.67
USP3-218ENST00000560202 CAPN1P07384 714 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 HGFP14210 728 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 NDUFS1P28331 727 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 AVPR2P30518 371 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 TSTA3Q13630 321 aaPredicted RBP10.87□□□□□ -0.67
USP3-218ENST00000560202 ELOCQ15369 112 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 TEAD4Q15561 434 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 PLK5Q496M5 336 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 IYDQ6PHW0 289 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 OR52E1Q8NGJ3 308 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 METTL6Q8TCB7 284 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 TWIST2Q8WVJ9 160 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 NELL1Q92832 810 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 CXorf40BQ96DE9 158 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 OR4K3Q96R72 315 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 NRTNQ99748 197 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 NUSAP1Q9BXS6 441 aaKnown RBP10.87□□□□□ -0.67
USP3-218ENST00000560202 WDR55Q9H6Y2 383 aaPredicted RBP10.87□□□□□ -0.67
USP3-218ENST00000560202 ACTR8Q9H981 624 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 CCDC177Q9NQR7 707 aaPredicted RBP10.87□□□□□ -0.67
USP3-218ENST00000560202 ABCF3Q9NUQ8 709 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 TRPS1Q9UHF7 1281 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 RNF11Q9Y3C5 154 aa10.87□□□□□ -0.67
USP3-218ENST00000560202 GOLGA8QA0A0J9YX86 632 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 A0A1B0GTW7 788 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 GOLGA8OA6NCC3 632 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 PRR5-ARHGAP8B1AHC4 643 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 GOLGA8NF8WBI6 632 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 HGSO14964 777 aaPredicted RBP10.86□□□□□ -0.67
USP3-218ENST00000560202 KDM1AO60341 852 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 DCTN3O75935 186 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 WFS1O76024 890 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 CHEK2O96017 543 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 GNSP15586 552 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 NPPBP16860 134 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 EPHA3P29320 983 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 CNR2P34972 360 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 GCKP35557 465 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 SLC19A1P41440 591 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 RAB28P51157 221 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 INHBCP55103 352 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 TUBB3Q13509 450 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 CMPK2Q5EBM0 449 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 PRAMEF14Q5SWL7 426 aa10.86□□□□□ -0.67
USP3-218ENST00000560202 SUSD1Q6UWL2 747 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms