RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 HIBCHQ6NVY1 386 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 MICALCLQ6ZW33 695 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 NDUFAF7Q7L592 441 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 NLRP9Q7RTR0 991 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 PRSS58Q8IYP2 241 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 AMER2Q8N7J2 671 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 STT3BQ8TCJ2 826 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 ULK4Q96C45 1275 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 IQCDQ96DY2 449 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 MAGED4Q96JG8 741 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 ZNF285Q96NJ3 590 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 FCRL5Q96RD9 977 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 RNF32Q9H0A6 362 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 GPAMQ9HCL2 828 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 ENAMQ9NRM1 1142 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 C3orf18Q9UK00 162 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 ASF1AQ9Y294 204 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 TDRKHQ9Y2W6 561 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 PCDHGB6Q9Y5F9 930 aa12.23□□□□□ -0.45
RABGGTA-213ENST00000560127 IGLV3-16A0A075B6K0 115 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 FAM221AA4D161 298 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 CFAP99D6REC4 459 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 ZGLP1P0C6A0 271 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 CDKN1CP49918 316 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 ZNF75DP51815 510 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 DYNLT1P63172 113 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 CACNG1Q06432 222 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 MPP3Q13368 585 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 GRM7Q14831 915 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 LONRF1Q17RB8 773 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 YOD1Q5VVQ6 348 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 ZNF449Q6P9G9 518 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 SNX20Q7Z614 316 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 VSIG1Q86XK7 387 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 TGIF2LYQ8IUE0 185 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 SPPL2CQ8IUH8 684 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 TBC1D21Q8IYX1 336 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 OR13C4Q8NGS5 318 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 THAP3Q8WTV1 239 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 HEXDCQ8WVB3 486 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 MIEF2Q96C03 454 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 CHP1Q99653 195 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 MAK16Q9BXY0 300 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 PACSIN1Q9BY11 444 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 ABHD10Q9NUJ1 306 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 IL1RAPL1Q9NZN1 696 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 TNFRSF10DQ9UBN6 386 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 MPDZO75970 2070 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 STAB1Q9NY15 2570 aa12.22□□□□□ -0.45
RABGGTA-213ENST00000560127 A0A1W2PQ72 361 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 FITM1A5D6W6 292 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 OR5H15A6NDH6 313 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 C2orf81A6NN90 581 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 WFS1O76024 890 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 AGTP01019 485 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 ITGAMP11215 1152 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 DRD2P14416 443 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 ZFXP17010 805 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 IGFBP2P18065 325 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 DNAJA1P31689 397 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 GRIA3P42263 894 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 RAB28P51157 221 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 EEF1A2Q05639 463 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 TFDP3Q5H9I0 405 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 TCTE1Q5JU00 501 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 CNSTQ6PJW8 725 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 ARHGEF18Q6ZSZ5 1173 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 LAPTM4BQ86VI4 370 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 RFX6Q8HWS3 928 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 ZNF567Q8N184 647 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 CLDN19Q8N6F1 224 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 TC2NQ8N9U0 490 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 OR5K2Q8NHB8 316 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 SUN3Q8TAQ9 357 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 GPR137Q96N19 417 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 GSX1Q9H4S2 264 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 VPS37BQ9H9H4 285 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 ZDHHC3Q9NYG2 299 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 CTTNBP2NLQ9P2B4 639 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 KLHL8Q9P2G9 620 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 SAE1Q9UBE0 346 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 ZNF282Q9UDV7 671 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 POLG2Q9UHN1 485 aa12.21□□□□□ -0.45
RABGGTA-213ENST00000560127 SCN3AQ9NY46 2000 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 ATRQ13535 2644 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 IGHV1-45A0A0A0MS14 117 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 C5orf60A6NFR6 353 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 CCL22O00626 93 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 ZNHIT1O43257 154 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 TPM3P06753 285 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 ITGALP20701 1170 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 IST1P53990 364 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 OCA2Q04671 838 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 MSLNQ13421 630 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 TRIM14Q14142 442 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 FAM214AQ32MH5 1076 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 ALKBH5Q6P6C2 394 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 RIPOR1Q6ZS17 1223 aa12.2□□□□□ -0.46
RABGGTA-213ENST00000560127 PID1Q7Z2X4 250 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms