RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ANKRD66B4E2M5 251 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 M0QZ24 198 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 ANKRD28O15084 1053 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 CTSVO60911 334 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 BCAS2O75934 225 aaPredicted RBP3.47□□□□□ -1.85
SPG11-218ENST00000559754 PDE9AO76083 593 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 CELF2O95319 508 aaKnown RBP3.47□□□□□ -1.85
SPG11-218ENST00000559754 BCL10O95999 233 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 TPM2P07951 284 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 HMOX1P09601 288 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 LINGO3P0C6S8 592 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 ZNF883P0CG24 379 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 CSF2RAP15509 400 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 PFKFB1P16118 471 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 PRLRP16471 622 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 GJA1P17302 382 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 ADRA2CP18825 462 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 PCGF2P35227 344 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 SOAT1P35610 550 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 DCTP40126 519 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 PRCPP42785 496 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 ARCN1P48444 511 aaKnown RBP3.47□□□□□ -1.85
SPG11-218ENST00000559754 GPR143P51810 404 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 UBASH3AP57075 661 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 HTD2P86397 168 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 RBPJQ06330 500 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 RRS1Q15050 365 aaKnown RBP3.47□□□□□ -1.85
SPG11-218ENST00000559754 RPS6KA1Q15418 735 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 KBTBD12Q3ZCT8 623 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 KRT39Q6A163 491 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 TMEM270Q6UE05 265 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 C11orf57Q6ZUT1 292 aaPredicted RBP3.47□□□□□ -1.85
SPG11-218ENST00000559754 ADIPOR2Q86V24 386 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 CNTN4Q8IWV2 1026 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 KLHL7Q8IXQ5 586 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 MRPL43Q8N983 215 aaKnown RBP3.47□□□□□ -1.85
SPG11-218ENST00000559754 RBM15BQ8NDT2 890 aaKnown RBP3.47□□□□□ -1.85
SPG11-218ENST00000559754 C9orf43Q8TAL5 461 aaPredicted RBP3.47□□□□□ -1.85
SPG11-218ENST00000559754 HMGCLL1Q8TB92 370 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 IGSF8Q969P0 613 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 TEKT1Q969V4 418 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 PHF21AQ96BD5 680 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 ABHD8Q96I13 439 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 NUDCD1Q96RS6 583 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 ZNF350Q9GZX5 532 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 LRMDAQ9H2I8 198 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 KCNK15Q9H427 330 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 GOLPH3LQ9H4A5 285 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 TMEM206Q9H813 350 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 CNOT10Q9H9A5 744 aaKnown RBP3.47□□□□□ -1.85
SPG11-218ENST00000559754 SLC28A3Q9HAS3 691 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 TAS2R3Q9NYW6 316 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 ERAP1Q9NZ08 941 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.47□□□□□ -1.85
SPG11-218ENST00000559754 SEPT10Q9P0V9 454 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 ACTR3BQ9P1U1 418 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 VPS18Q9P253 973 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 OR14J1Q9UGF5 321 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 FBXW11Q9UKB1 542 aa3.47□□□□□ -1.85
SPG11-218ENST00000559754 PIN4Q9Y237 131 aaKnown RBP3.47□□□□□ -1.85
SPG11-218ENST00000559754 FAM90A26D6RGX4 464 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 H0YIN7 160 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 NOL3O60936 208 aaKnown RBP3.46□□□□□ -1.86
SPG11-218ENST00000559754 VIMP08670 466 aaKnown RBP3.46□□□□□ -1.86
SPG11-218ENST00000559754 FAM58BPP0C7Q3 252 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 PATE4P0C8F1 98 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 KRT5P13647 590 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 NR1D1P20393 614 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 UGT1A1P22309 533 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 NR2F2P24468 414 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 CDC25CP30307 473 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 CHRNB4P30926 498 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 APOBEC1P41238 236 aaKnown RBP3.46□□□□□ -1.86
SPG11-218ENST00000559754 NR2C2P49116 596 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 TAF6P49848 677 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 LUMP51884 338 aaPredicted RBP3.46□□□□□ -1.86
SPG11-218ENST00000559754 KIAA1024LP59773 190 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 COG7P83436 770 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 DLG2Q15700 870 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 ZNF789Q5FWF6 425 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 WDR38Q5JTN6 314 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 FAM91A1Q658Y4 838 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 TMEM198Q66K66 360 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 ZNF772Q68DY9 489 aaPredicted RBP3.46□□□□□ -1.86
SPG11-218ENST00000559754 ETFRF1Q6IPR1 90 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 PAPD4Q6PIY7 484 aaKnown RBP3.46□□□□□ -1.86
SPG11-218ENST00000559754 HAUS6Q7Z4H7 955 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 ABI3BPQ7Z7G0 1075 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 ADCK1Q86TW2 530 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 LDB1Q86U70 411 aaPredicted RBP3.46□□□□□ -1.86
SPG11-218ENST00000559754 CLYBLQ8N0X4 340 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 AFAP1Q8N556 730 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 ZBTB44Q8NCP5 570 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 ADAD2Q8NCV1 583 aaKnown RBP3.46□□□□□ -1.86
SPG11-218ENST00000559754 OR7G3Q8NG95 312 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 OR8K5Q8NH50 307 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 OR14L1PQ8NHC6 308 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 TAF15Q92804 592 aaKnown RBP eCLIP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms