RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 KLF11O14901 512 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 MATN3O15232 486 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 CLIC2O15247 247 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 PSMD3O43242 534 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 PLRG1O43660 514 aaKnown RBP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZNF217O75362 1048 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 DDNO94850 711 aaPredicted RBP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 GOSR1O95249 250 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 FTCDO95954 541 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 IGHV2-70P01814 119 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 EDN1P05305 212 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 TFAP2AP05549 437 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 GSTA1P08263 222 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 FAM86B2P0C5J1 330 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 RALAP11233 206 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 INSRRP14616 1297 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 TNNI3P19429 210 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 PRPHP41219 470 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMPOP42166 694 aaKnown RBP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 PPP3CCP48454 512 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 LHX1P48742 406 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 MBTD1Q05BQ5 628 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 PPP1R8Q12972 351 aaKnown RBP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 SLC39A14Q15043 492 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 TCTE1Q5JU00 501 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 LYSMD4Q5XG99 296 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 SLC2A7Q6PXP3 512 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 Q6ZTK2 550 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 SPRED1Q7Z699 444 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 TRIM74Q86UV6 250 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 TRIM73Q86UV7 250 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 LCA5Q86VQ0 697 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 SRRM1Q8IYB3 904 aaKnown RBP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 CFAP206Q8IYR0 622 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 KDM8Q8N371 416 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 CPSF7Q8N684 471 aaKnown RBP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 ARL6IP6Q8N6S5 226 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 NIPA2Q8N8Q9 360 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 NHLRC2Q8NBF2 726 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 UXS1Q8NBZ7 420 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 HJURPQ8NCD3 748 aaPredicted RBP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 ENGASEQ8NFI3 743 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 FIBINQ8TAL6 211 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 ARRDC2Q8TBH0 407 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 SSMEM1Q8WWF3 244 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 CORO2AQ92828 525 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 NSMCE2Q96MF7 247 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 GUCD1Q96NT3 240 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZMYND12Q9H0C1 365 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 RBM38Q9H0Z9 239 aaKnown RBP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 MAGEF1Q9HAY2 307 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMEM30AQ9NV96 361 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 CIDEBQ9UHD4 219 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 PADI1Q9ULC6 663 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 STX8Q9UNK0 236 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 TDRKHQ9Y2W6 561 aaKnown RBP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 SELENOKQ9Y6D0 94 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 CHD7Q9P2D1 2997 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 DUXAA6NLW8 204 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 B3GALNT1O75752 331 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 BCL10O95999 233 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 KRT8P05787 483 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 T-ENOLP0DO92 83 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 CHRNB1P11230 501 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 GP1BBP13224 206 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 VCLP18206 1134 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 CYP2A7P20853 494 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 PSMA2P25787 234 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMOD1P28289 359 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 TIA1P31483 386 aaKnown RBP eCLIP1.29□□□□□ -2.23e-7■■■■■ 29.5
CTDSPL2-202ENST00000558373 CSTF2P33240 577 aaKnown RBP eCLIP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 WNT5AP41221 380 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 BNC1Q01954 994 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 PPATQ06203 517 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 GRIK3Q13003 919 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 TNK1Q13470 666 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 DPYSQ14117 519 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 RBMS2Q15434 407 aaKnown RBP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 FAM182AQ5T1J6 154 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 PDSS1Q5T2R2 415 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 ARMC3Q5W041 872 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 ARHGAP17Q68EM7 881 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 TCEAL6Q6IPX3 200 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 NEK5Q6P3R8 708 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMEM71Q6P5X7 295 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 CWC27Q6UX04 472 aaKnown RBP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 GCNT7Q6ZNI0 430 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 QSOX2Q6ZRP7 698 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 COLCA1Q6ZS62 124 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 YTHDF3Q7Z739 585 aaKnown RBP1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 ADIPOR2Q86V24 386 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 CNGA4Q8IV77 575 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 DNAJC10Q8IXB1 793 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 THAP8Q8NA92 274 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZFAND2BQ8WV99 257 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 SUSD6Q92537 303 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 MR1Q95460 341 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 EME1Q96AY2 570 aa1.29□□□□□ -2.2
CTDSPL2-202ENST00000558373 BSCL2Q96G97 398 aaPredicted RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms