RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 GPS2Q13227 327 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 PLD1Q13393 1074 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 MTF1Q14872 753 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 DNTTIP2Q5QJE6 756 aaKnown RBP5.74□□□□□ -1.49
RTF1-204ENST00000558117 SPATA1Q5VX52 437 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 ARMC3Q5W041 872 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 FAM83HQ6ZRV2 1179 aaPredicted RBP5.74□□□□□ -1.49
RTF1-204ENST00000558117 EFCAB13Q8IY85 973 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 RASSF8Q8NHQ8 419 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 ARHGAP45Q92619 1136 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 HDAC2Q92769 488 aaKnown RBP5.74□□□□□ -1.49
RTF1-204ENST00000558117 ELP4Q96EB1 424 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 CCDC51Q96ER9 411 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 GPR63Q9BZJ6 419 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 LINC00597Q9H2U6 94 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 TM9SF3Q9HD45 589 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 SMYD2Q9NRG4 433 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 NRBP2Q9NSY0 501 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 PCDHA7Q9UN72 937 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 TNNQ9UQP3 1299 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 ASB3Q9Y575 518 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 MYO18AQ92614 2054 aaKnown RBP5.74□□□□□ -1.49
RTF1-204ENST00000558117 TGP01266 2768 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 CUBNO60494 3623 aa5.74□□□□□ -1.49
RTF1-204ENST00000558117 TMEM131Q92545 1883 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 MS4A18H0YCH9 400 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 RGS14O43566 566 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 SPRY3O43610 288 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 CEP104O60308 925 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 TSPAN1O60635 241 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 NGFRP08138 427 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 PGM1P36871 562 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 TNFSF9P41273 254 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 TNFRSF4P43489 277 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 IFNAR2P48551 515 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 KLRB1Q12918 225 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 ERV3-1Q14264 604 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 ALX1Q15699 326 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 ZNF77Q15935 545 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 EIF2S3LQ2VIR3 472 aaKnown RBP5.73□□□□□ -1.49
RTF1-204ENST00000558117 ZNF284Q2VY69 593 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 CEP55Q53EZ4 464 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 ATG9BQ674R7 924 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 MOB3CQ70IA8 216 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 TAOK1Q7L7X3 1001 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 PRSS45Q7RTY3 260 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 ADGRG6Q86SQ4 1221 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 TMEM150AQ86TG1 271 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 TMTC1Q8IUR5 882 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 TTC30BQ8N4P2 665 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 RFWD2Q8NHY2 731 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 C9orf43Q8TAL5 461 aaPredicted RBP5.73□□□□□ -1.49
RTF1-204ENST00000558117 ADAMTS15Q8TE58 950 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 CPB2Q96IY4 423 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 ZNF479Q96JC4 524 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 NAP1L5Q96NT1 182 aaPredicted RBP5.73□□□□□ -1.49
RTF1-204ENST00000558117 CENPOQ9BU64 300 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 MVB12BQ9H7P6 319 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 IFT80Q9P2H3 777 aaPredicted RBP5.73□□□□□ -1.49
RTF1-204ENST00000558117 PTGDR2Q9Y5Y4 395 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 ANK1P16157 1881 aa5.73□□□□□ -1.49
RTF1-204ENST00000558117 A0A096LPK6 155 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 PABPN1LA6NDY0 278 aaKnown RBP5.72□□□□□ -1.49
RTF1-204ENST00000558117 B4E171 279 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 TRAPPC3O43617 180 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 LIASO43766 372 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 APODP05090 189 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 RARGP13631 454 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 CD99P14209 185 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 CDC25CP30307 473 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 AXLP30530 894 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 HOXD3P31249 432 aaPredicted RBP5.72□□□□□ -1.49
RTF1-204ENST00000558117 TSPAN7P41732 249 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 PRKCEQ02156 737 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 NFIL3Q16649 462 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 UPP1Q16831 310 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 ISXQ2M1V0 245 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 FSCBQ5H9T9 825 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 FNBP1LQ5T0N5 605 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 SFMBT2Q5VUG0 894 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 RUSC1-AS1Q66K80 236 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 NOTUMQ6P988 496 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 IL20RBQ6UXL0 311 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 C4orf50Q6ZRC1 276 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 MEPCEQ7L2J0 689 aaKnown RBP5.72□□□□□ -1.49
RTF1-204ENST00000558117 MON1AQ86VX9 555 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 CHD1LQ86WJ1 897 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 HACE1Q8IYU2 909 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 CPXM2Q8N436 756 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 MAB21L3Q8N8X9 362 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 TEX45Q8NA69 505 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 SLC35F5Q8WV83 523 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 ERLEC1Q96DZ1 483 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 KIF1BPQ96EK5 621 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 NPFFR1Q9GZQ6 430 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 TTLL3Q9Y4R7 772 aa5.72□□□□□ -1.49
RTF1-204ENST00000558117 SRPRBQ9Y5M8 271 aaKnown RBP5.72□□□□□ -1.49
RTF1-204ENST00000558117 MEGF8Q7Z7M0 2845 aa5.71□□□□□ -1.49
RTF1-204ENST00000558117 C17orf113A0A1B0GUU1 675 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 TMEM150BA6NC51 233 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms