RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 ARL15Q9NXU5 204 aa13.84□□□□□ -0.19
USP3-205ENST00000557884 UTP6Q9NYH9 597 aaKnown RBP13.84□□□□□ -0.19
USP3-205ENST00000557884 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.84□□□□□ -0.19
USP3-205ENST00000557884 STOX2Q9P2F5 926 aaPredicted RBP13.84□□□□□ -0.19
USP3-205ENST00000557884 CTNNAL1Q9UBT7 734 aa13.84□□□□□ -0.19
USP3-205ENST00000557884 DMXL2Q8TDJ6 3036 aa13.84□□□□□ -0.19
USP3-205ENST00000557884 ACACBO00763 2458 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 CELSR3Q9NYQ7 3312 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 A0A1W2PPV9 198 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 C9orf172C9J069 976 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 DXOO77932 396 aaKnown RBP13.83□□□□□ -0.2
USP3-205ENST00000557884 GUCA1CO95843 209 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 HIST1H2AGP0C0S8 130 aaPredicted RBP13.83□□□□□ -0.2
USP3-205ENST00000557884 ERGP11308 486 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 HIST1H2ADP20671 130 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 GCAP28676 217 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 IMPA1P29218 277 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 SLC5A2P31639 672 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 RPA3P35244 121 aaPredicted RBP13.83□□□□□ -0.2
USP3-205ENST00000557884 HSD17B2P37059 387 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 MLLT3P42568 568 aaPredicted RBP13.83□□□□□ -0.2
USP3-205ENST00000557884 SERPINB8P50452 374 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 SERPINB9P50453 376 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 IRF9Q00978 393 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 MC2RQ01718 297 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 ARHGAP19Q14CB8 494 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 ZIC1Q15915 447 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 SLC5A12Q1EHB4 618 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 TBC1D25Q3MII6 688 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 WDR93Q6P2C0 686 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 TAOK1Q7L7X3 1001 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 C19orf47Q8N9M1 422 aaKnown RBP13.83□□□□□ -0.2
USP3-205ENST00000557884 HMGCLL1Q8TB92 370 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 SLC22A18Q96BI1 424 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 ALKBH8Q96BT7 664 aaKnown RBP13.83□□□□□ -0.2
USP3-205ENST00000557884 HIST1H2AHQ96KK5 128 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 CCDC138Q96M89 665 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 CNTNAP3BQ96NU0 1288 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 OR6C1Q96RD1 312 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 TAAR9Q96RI9 348 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 HIST1H2AJQ99878 128 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 H2AFJQ9BTM1 129 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 CNTNAP3Q9BZ76 1288 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 DERL2Q9GZP9 239 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 TWSG1Q9GZX9 223 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 THSD1Q9NS62 852 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 FOXJ2Q9P0K8 574 aa13.83□□□□□ -0.2
USP3-205ENST00000557884 ZNF839A8K0R7 811 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 CDRT15L2A8MXV6 281 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 TRIM49D1C9J1S8 452 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 E7ENX8 843 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 POLR1CO15160 346 aaPredicted RBP13.82□□□□□ -0.2
USP3-205ENST00000557884 TLX3O43711 291 aaPredicted RBP13.82□□□□□ -0.2
USP3-205ENST00000557884 PRICKLE3O43900 615 aaPredicted RBP13.82□□□□□ -0.2
USP3-205ENST00000557884 KRT38O76015 456 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 ALDOAP04075 364 aaKnown RBP13.82□□□□□ -0.2
USP3-205ENST00000557884 SHBGP04278 402 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 CAPNS1P04632 268 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 C2P06681 752 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 CD1DP15813 335 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 MAGP20916 626 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 TYK2P29597 1187 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 HSD17B3P37058 310 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 YBX1P67809 324 aaKnown RBP13.82□□□□□ -0.2
USP3-205ENST00000557884 TAP2Q03519 686 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 DLG1Q12959 904 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 TUBB3Q13509 450 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 NAE1Q13564 534 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 OR4D1Q15615 310 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 GPR19Q15760 415 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 PPP1R3AQ16821 1122 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 DEFB110Q30KQ9 67 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 TAF1BQ53T94 588 aaPredicted RBP13.82□□□□□ -0.2
USP3-205ENST00000557884 TMTC4Q5T4D3 741 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 THEMIS2Q5TEJ8 643 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 KIAA1614Q5VZ46 1190 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 AGTRAPQ6RW13 159 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 IGF2-ASQ6U949 168 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 FRA10AC1Q70Z53 315 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 ADAMTSL2Q86TH1 951 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 TBC1D1Q86TI0 1168 aaPredicted RBP13.82□□□□□ -0.2
USP3-205ENST00000557884 KMT5CQ86Y97 462 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 CARFQ8N187 725 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 D2HGDHQ8N465 521 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 AENQ8WTP8 325 aaKnown RBP13.82□□□□□ -0.2
USP3-205ENST00000557884 KCTD4Q8WVF5 259 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 PTERQ96BW5 349 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 MED8Q96G25 268 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 DHRS4Q9BTZ2 278 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 TRIM54Q9BYV2 358 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 ATG10Q9H0Y0 220 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 VPS11Q9H270 941 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 PDE7BQ9NP56 450 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 RRAGDQ9NQL2 400 aaPredicted RBP13.82□□□□□ -0.2
USP3-205ENST00000557884 IGSF5Q9NSI5 407 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 TAC3Q9UHF0 121 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 ZNF180Q9UJW8 692 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 TLK1Q9UKI8 766 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 BTRCQ9Y297 605 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 PCDHB11Q9Y5F2 797 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms