RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 IL33O95760 270 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 NDST3O95803 873 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 MT-CYBP00156 380 aaPredicted RBP5.65□□□□□ -1.5
VPS33B-207ENST00000557470 UMODP07911 640 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 STSP08842 583 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 CBSLP0DN79 551 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 SKILP12757 684 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 PVRP15151 417 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 RHCEP18577 417 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 UGT1A6P19224 532 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 AGXTP21549 392 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 UGT1A1P22309 533 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 UGT1A4P22310 534 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 ITGA3P26006 1051 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 CBSP35520 551 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 HMGCLP35914 325 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 HADHAP40939 763 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 FOLR3P41439 243 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 PRKCIP41743 596 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 SOX8P57073 446 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 MYL5Q02045 173 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 ADCY2Q08462 1091 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 PRKAA1Q13131 559 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 SSPNQ14714 243 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 NOMO1Q15155 1222 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 PCBP2Q15366 365 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS33B-207ENST00000557470 SLC14A2Q15849 920 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 HADHQ16836 314 aaKnown RBP5.65□□□□□ -1.5
VPS33B-207ENST00000557470 SPRED3Q2MJR0 410 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 ZXDCQ2QGD7 858 aaPredicted RBP5.65□□□□□ -1.5
VPS33B-207ENST00000557470 CCDC92Q53HC0 331 aaPredicted RBP5.65□□□□□ -1.5
VPS33B-207ENST00000557470 LDLRAP1Q5SW96 308 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 FNBP1LQ5T0N5 605 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 GPRC6AQ5T6X5 926 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 C1orf189Q5VU69 101 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 MLIPQ5VWP3 458 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 ARMC3Q5W041 872 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 CDHR3Q6ZTQ4 885 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 B4GALNT4Q76KP1 1039 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 DET1Q7L5Y6 550 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 PPP1R32Q7Z5V6 425 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 NT5DC3Q86UY8 548 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 FJX1Q86VR8 437 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 LILRA3Q8N6C8 439 aaPredicted RBP5.65□□□□□ -1.5
VPS33B-207ENST00000557470 PLD5Q8N7P1 536 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 NAXEQ8NCW5 288 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 OR4E2Q8NGC2 313 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 OR2Y1Q8NGV0 311 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 SPATA22Q8NHS9 363 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 BRSK1Q8TDC3 778 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 GRHL3Q8TE85 626 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 PPP4R1Q8TF05 950 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 ZFPM2Q8WW38 1151 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 LCN9Q8WX39 176 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 LURAP1Q96LR2 239 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 NSUN5Q96P11 429 aaKnown RBP5.65□□□□□ -1.5
VPS33B-207ENST00000557470 AGAP3Q96P47 875 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 GBP5Q96PP8 586 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 TRAPPC9Q96Q05 1148 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 SLX1AQ9BQ83 275 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 PITPNM3Q9BZ71 974 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 XPO4Q9C0E2 1151 aaKnown RBP5.65□□□□□ -1.5
VPS33B-207ENST00000557470 SLC7A5P2Q9GIP4 190 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 THAP2Q9H0W7 228 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 SLC25A51Q9H1U9 297 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 UGT1A7Q9HAW7 530 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 UGT1A10Q9HAW8 530 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 UGT1A8Q9HAW9 530 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 CBX8Q9HC52 389 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 C1GALT1Q9NS00 363 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 RASSF1Q9NS23 344 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 AIPL1Q9NZN9 384 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 FRRS1LQ9P0K9 344 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 COPG2Q9UBF2 871 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS33B-207ENST00000557470 SERTAD3Q9UJW9 196 aa5.65□□□□□ -1.5
VPS33B-207ENST00000557470 CNTRLQ7Z7A1 2325 aa5.65□□□□□ -1.51
VPS33B-207ENST00000557470 FER1L5A0AVI2 2057 aa5.65□□□□□ -1.51
VPS33B-207ENST00000557470 PKDREJQ9NTG1 2253 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 GLYATL1P3A0A0U1RQE8 302 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 A0A1W2PQJ5 194 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 HEATR9A2RTY3 570 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 H3BMH7 237 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 AGPSO00116 658 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 MYO1FO00160 1098 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 MATN2O00339 956 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 BTN3A3O00478 584 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 BTN3A1O00481 513 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 CBFA2T2O43439 604 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 HCRTR1O43613 425 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 BUD23O43709 281 aaKnown RBP5.64□□□□□ -1.51
VPS33B-207ENST00000557470 KLHL41O60662 606 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 IGHEP01854 428 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 CYP1A2P05177 515 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 CTSBP07858 339 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 SNRPB2P08579 225 aaKnown RBP5.64□□□□□ -1.51
VPS33B-207ENST00000557470 HBQ1P09105 142 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 SLC35G4P0C7Q5 338 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 NME2P22392 152 aa5.64□□□□□ -1.51
VPS33B-207ENST00000557470 PRDX3P30048 256 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms