RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 ACTR8Q9H981 624 aa10.5□□□□□ -0.73
LINC01550-206ENST00000556462 WASH6PQ9NQA3 447 aa10.5□□□□□ -0.73
LINC01550-206ENST00000556462 AASDHPPTQ9NRN7 309 aa10.5□□□□□ -0.73
LINC01550-206ENST00000556462 IMP3Q9NV31 184 aaKnown RBP10.5□□□□□ -0.73
LINC01550-206ENST00000556462 POLG2Q9UHN1 485 aa10.5□□□□□ -0.73
LINC01550-206ENST00000556462 NCOR1O75376 2440 aa10.5□□□□□ -0.73
LINC01550-206ENST00000556462 PRAMEF33A0A0G2JMD5 474 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 A6NCN8 305 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 FFAR3O14843 346 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 GPR42O15529 346 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 TNFP01375 233 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 PRR35P0CG20 571 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 CD1EP15812 388 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 CD22P20273 847 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 HMOX2P30519 316 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 CHIT1Q13231 466 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 E2F2Q14209 437 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 ARHGAP19Q14CB8 494 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 RPE65Q16518 533 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 CPSF6Q16630 551 aaKnown RBP eCLIP10.49□□□□□ -0.73
LINC01550-206ENST00000556462 ZNF542PQ5EBM4 170 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 CAPN13Q6MZZ7 669 aaPredicted RBP10.49□□□□□ -0.73
LINC01550-206ENST00000556462 TSSK4Q6SA08 328 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 IL27RAQ6UWB1 636 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 SUSD1Q6UWL2 747 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 SLC36A4Q6YBV0 504 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 MFSD2AQ8NA29 543 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 NSL1Q96IY1 281 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 SPACA7Q96KW9 195 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 CATSPER2Q96P56 530 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 HBEGFQ99075 208 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 FARSBQ9NSD9 589 aaKnown RBP10.49□□□□□ -0.73
LINC01550-206ENST00000556462 GIMAP2Q9UG22 337 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 G3BP2Q9UN86 482 aaKnown RBP10.49□□□□□ -0.73
LINC01550-206ENST00000556462 CCL27Q9Y4X3 112 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 E7EQ34 232 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 UGDHO60701 494 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 ALDOCP09972 364 aaKnown RBP10.49□□□□□ -0.73
LINC01550-206ENST00000556462 CD38P28907 300 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 ACTR1BP42025 376 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 ACTR1AP61163 376 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 NCALDP61601 193 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 RACK1P63244 317 aaKnown RBP10.49□□□□□ -0.73
LINC01550-206ENST00000556462 TBCCQ15814 346 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 CYP2A13Q16696 494 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 LIPJQ5W064 366 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 SLC30A9Q6PML9 568 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 LAYNQ6UX15 382 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 RNF165Q6ZSG1 346 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 MYLK4Q86YV6 388 aaPredicted RBP10.49□□□□□ -0.73
LINC01550-206ENST00000556462 RGL4Q8IZJ4 473 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 GPBAR1Q8TDU6 330 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 USP7Q93009 1102 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 NEIL2Q969S2 332 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 TUBGCP3Q96CW5 907 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 SLC7A6OSQ96CW6 309 aaPredicted RBP10.49□□□□□ -0.73
LINC01550-206ENST00000556462 MARK4Q96L34 752 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 HSPA12BQ96MM6 686 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 CAMK1GQ96NX5 476 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 LNPEPQ9UIQ6 1025 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 COPG1Q9Y678 874 aaKnown RBP10.49□□□□□ -0.73
LINC01550-206ENST00000556462 KCNE2Q9Y6J6 123 aa10.49□□□□□ -0.73
LINC01550-206ENST00000556462 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 CCDC163A0A0D9SF12 145 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 MANBAO00462 879 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 UBDO15205 165 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 PEX11AO75192 247 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 ULK1O75385 1050 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 MTHFD1P11586 935 aaKnown RBP10.48□□□□□ -0.73
LINC01550-206ENST00000556462 GNAZP19086 355 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 HSD17B2P37059 387 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 HALP42357 657 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 CASP2P42575 452 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 IRF8Q02556 426 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 KLF10Q13118 480 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 DOC2AQ14183 400 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 XKR6Q5GH73 641 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 SLCO4C1Q6ZQN7 724 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 TRIM46Q7Z4K8 759 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 IQCHQ86VS3 1027 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 DCP2Q8IU60 420 aaKnown RBP10.48□□□□□ -0.73
LINC01550-206ENST00000556462 TMEFF1Q8IYR6 380 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 SFRP1Q8N474 314 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 C2orf73Q8N5S3 287 aaPredicted RBP10.48□□□□□ -0.73
LINC01550-206ENST00000556462 LINC01555Q8NAE3 123 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 SETD7Q8WTS6 366 aaKnown RBP10.48□□□□□ -0.73
LINC01550-206ENST00000556462 DNASE2BQ8WZ79 361 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 MIPEPQ99797 713 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 TUBB6Q9BUF5 446 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 SLC29A3Q9BZD2 475 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 MVB12BQ9H7P6 319 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 PFDN4Q9NQP4 134 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 CCDC177Q9NQR7 707 aaPredicted RBP10.48□□□□□ -0.73
LINC01550-206ENST00000556462 SPATA6Q9NWH7 488 aaPredicted RBP10.48□□□□□ -0.73
LINC01550-206ENST00000556462 GPRC5BQ9NZH0 403 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 ZNF624Q9P2J8 865 aaPredicted RBP10.48□□□□□ -0.73
LINC01550-206ENST00000556462 SH2B3Q9UQQ2 575 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 A0A1W2PPV9 198 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 MAP3K13O43283 966 aa10.48□□□□□ -0.73
LINC01550-206ENST00000556462 VPS4BO75351 444 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms