RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 RBBP4Q09028 425 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 MEDAGQ5VYS4 303 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 KCNJ9Q92806 393 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 DGAT2Q96PD7 388 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 NDC1Q9BTX1 674 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 ATG10Q9H0Y0 220 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 WDR55Q9H6Y2 383 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-216ENST00000556083 PTGES2Q9H7Z7 377 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 ZCCHC3Q9NUD5 404 aaKnown RBP10.49□□□□□ -0.73
ACTN1-216ENST00000556083 TMEM9Q9P0T7 183 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 RIPK3Q9Y572 518 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 A0A0J9YVX5 310 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 TIPRLO75663 272 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 ELNP15502 786 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 CXCR1P25024 350 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 ACVR2AP27037 513 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 DPP6P42658 865 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 APLP1P51693 650 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 ACTR1AP61163 376 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 GALNT2Q10471 571 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 DECR1Q16698 335 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 CYS1Q717R9 158 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 SPPL2CQ8IUH8 684 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 ZMIZ2Q8NF64 920 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 VANGL1Q8TAA9 524 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-216ENST00000556083 HAVCR2Q8TDQ0 301 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 LENG8Q96PV6 779 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-216ENST00000556083 MED28Q9H204 178 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 EVA1AQ9H8M9 152 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 TMEM248Q9NWD8 314 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 R3HDM2Q9Y2K5 976 aaKnown RBP10.49□□□□□ -0.73
ACTN1-216ENST00000556083 CAMTA1Q9Y6Y1 1673 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 BTN3A3O00478 584 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 MAN2B1O00754 1011 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 F2P00734 622 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 RLN1P04808 185 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 MTHFD1P11586 935 aaKnown RBP10.49□□□□□ -0.73
ACTN1-216ENST00000556083 ATP1B2P14415 290 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-216ENST00000556083 DNAJB13P59910 316 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 CBLBQ13191 982 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 IL18Q14116 193 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 NPTX1Q15818 432 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 SOWAHAQ2M3V2 549 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 LIN52Q52LA3 116 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 RFWD3Q6PCD5 774 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 SDR16C5Q8N3Y7 309 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 TNFAIP8L1Q8WVP5 186 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 RBPJLQ9UBG7 517 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 IFT52Q9Y366 437 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 MAP4K5Q9Y4K4 846 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 FAM159BA6NKW6 160 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 YJEFN3A6XGL0 299 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 PIP5K1BO14986 540 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 SNX4O95219 450 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 RORCP51449 518 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 GJA9P57773 515 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 CYP4F2P78329 520 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 DGKZQ13574 1117 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 SMU1Q2TAY7 513 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 MYLK3Q32MK0 819 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 RUNDC3AQ59EK9 446 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 SLC30A6Q6NXT4 461 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 ASB18Q6ZVZ8 466 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 USP30Q70CQ3 517 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 GPR151Q8TDV0 419 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 TMEM234Q8WY98 164 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 SLC39A3Q9BRY0 314 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 ABCB8Q9NUT2 735 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 POLR3BQ9NW08 1133 aaPredicted RBP10.49□□□□□ -0.73
ACTN1-216ENST00000556083 SERTAD3Q9UJW9 196 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF221Q9UK13 617 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 WASF3Q9UPY6 502 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 ARHGEF15O94989 841 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 GSRP00390 522 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 SOD2P04179 222 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 MPC1LP0DKB6 136 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 HAPLN1P10915 354 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-216ENST00000556083 ACSL1P33121 698 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 GRIA1P42261 906 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 SOX9P48436 509 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 IDH3AP50213 366 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 PUDPQ08623 228 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 DAG1Q14118 895 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 ADGRE1Q14246 886 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 POM121L1PQ3SYA9 428 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 SLC9A4Q6AI14 798 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 RABEPKQ7Z6M1 372 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 RBM23Q86U06 439 aaKnown RBP10.48□□□□□ -0.73
ACTN1-216ENST00000556083 TMEM139Q8IV31 216 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 NAT8LQ8N9F0 302 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 GOLGA2P5Q9HBQ8 144 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 WDR6Q9NNW5 1121 aaKnown RBP10.48□□□□□ -0.73
ACTN1-216ENST00000556083 EQTNQ9NQ60 294 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 MED1Q15648 1581 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-216ENST00000556083 DAPL1A0PJW8 107 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 ENTPD6O75354 484 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 NMBRP28336 390 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 SLC25A25Q6KCM7 469 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF550Q7Z398 422 aa10.48□□□□□ -0.73
ACTN1-216ENST00000556083 HPS6Q86YV9 775 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms