RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 C8GP07360 202 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 ZNF28P17035 718 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 GABRB3P28472 473 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 OAS2P29728 719 aaKnown RBP11.67□□□□□ -0.54
SRP54-206ENST00000555317 STX2P32856 288 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 RPA3P35244 121 aaPredicted RBP11.67□□□□□ -0.54
SRP54-206ENST00000555317 CDKN2DP55273 166 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 IL2P60568 153 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 SP140Q13342 867 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 GRB7Q14451 532 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 ARHGAP19Q14CB8 494 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 CCSMST1Q4G0I0 132 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 GLE1Q53GS7 698 aaKnown RBP11.67□□□□□ -0.54
SRP54-206ENST00000555317 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.67□□□□□ -0.54
SRP54-206ENST00000555317 INO80CQ6PI98 192 aaPredicted RBP11.67□□□□□ -0.54
SRP54-206ENST00000555317 CDHR3Q6ZTQ4 885 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 C3orf62Q6ZUJ4 267 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 PIWIL4Q7Z3Z4 852 aaKnown RBP11.67□□□□□ -0.54
SRP54-206ENST00000555317 CTAGE3PQ8IX95 158 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 SYTL1Q8IYJ3 562 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 MMGT1Q8N4V1 131 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 LINC01555Q8NAE3 123 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 MCOLN3Q8TDD5 553 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 ASB11Q8WXH4 323 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 SMPDL3AQ92484 453 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 ZNF501Q96CX3 271 aaPredicted RBP11.67□□□□□ -0.54
SRP54-206ENST00000555317 CLIP3Q96DZ5 547 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 LINGO1Q96FE5 620 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 FAM129AQ9BZQ8 928 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 MOCS1Q9NZB8 636 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 PADI1Q9ULC6 663 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 MED16Q9Y2X0 877 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 VWA7Q9Y334 891 aa11.67□□□□□ -0.54
SRP54-206ENST00000555317 FAM95CA0A1B0GW59 222 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 KRT87PA6NCN2 255 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 ZNF891A8MT65 544 aaPredicted RBP11.66□□□□□ -0.54
SRP54-206ENST00000555317 OR2B3O76000 313 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 CCNDBP1O95273 360 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 NTRK1P04629 796 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 KLK3P07288 261 aaPredicted RBP11.66□□□□□ -0.54
SRP54-206ENST00000555317 HBQ1P09105 142 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 HIST1H2AGP0C0S8 130 aaPredicted RBP11.66□□□□□ -0.54
SRP54-206ENST00000555317 MSL3P1P0C860 447 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 LIFP15018 202 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 HIST1H2ADP20671 130 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 MAGP20916 626 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 FDXRP22570 491 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 CMPK1P30085 196 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 PEBP1P30086 187 aaKnown RBP11.66□□□□□ -0.54
SRP54-206ENST00000555317 SSTR1P30872 391 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 DLSTP36957 453 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 STAT5AP42229 794 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 MAGEA4P43358 317 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 PNLIPRP1P54315 467 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 CBLBQ13191 982 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 CYP2A13Q16696 494 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 DEFB110Q30KQ9 67 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 THEMIS2Q5TEJ8 643 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 PAQR3Q6TCH7 311 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 ZC3HC1Q86WB0 502 aaKnown RBP11.66□□□□□ -0.54
SRP54-206ENST00000555317 FBXO15Q8NCQ5 510 aaPredicted RBP11.66□□□□□ -0.54
SRP54-206ENST00000555317 OR1L3Q8NH93 324 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 HMGCLL1Q8TB92 370 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 EEF1AKMT1Q8WVE0 214 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 IFT81Q8WYA0 676 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 HIST1H2AHQ96KK5 128 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 PKP4Q99569 1192 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 MIPEPQ99797 713 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 HIST1H2AJQ99878 128 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 H2AFJQ9BTM1 129 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 MENTQ9BUN1 341 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 TRIM54Q9BYV2 358 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 CHRNA10Q9GZZ6 450 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 TSPYL1Q9H0U9 437 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 RHOJQ9H4E5 214 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 ACTR5Q9H9F9 607 aaPredicted RBP11.66□□□□□ -0.54
SRP54-206ENST00000555317 ABCF3Q9NUQ8 709 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 UTP6Q9NYH9 597 aaKnown RBP11.66□□□□□ -0.54
SRP54-206ENST00000555317 PLCL2Q9UPR0 1127 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 PCDHGA4Q9Y5G9 962 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 PSAT1Q9Y617 370 aa11.66□□□□□ -0.54
SRP54-206ENST00000555317 ATMQ13315 3056 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 SPTA1P02549 2419 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 TCRBV9S1A1TA0A576 114 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 EIF4E1BA6NMX2 242 aaKnown RBP11.65□□□□□ -0.54
SRP54-206ENST00000555317 GFYI3L273 518 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 SLC16A5O15375 505 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 TIAF1O95411 115 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 PHBP35232 272 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 MC1RQ01726 317 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 RHDQ02161 417 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 SRSF6Q13247 344 aaKnown RBP11.65□□□□□ -0.54
SRP54-206ENST00000555317 TRADDQ15628 312 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 ZC3H12BQ5HYM0 836 aaKnown RBP11.65□□□□□ -0.54
SRP54-206ENST00000555317 ZDHHC24Q6UX98 284 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 TIPARPQ7Z3E1 657 aaKnown RBP11.65□□□□□ -0.54
SRP54-206ENST00000555317 FAM20CQ8IXL6 584 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 NKAPQ8N5F7 415 aaKnown RBP11.65□□□□□ -0.54
SRP54-206ENST00000555317 LMNTD1Q8N9Z9 388 aa11.65□□□□□ -0.54
SRP54-206ENST00000555317 NOA1Q8NC60 698 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms