RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SNED1Q8TER0 1413 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 NIPSNAP2O75323 286 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 NPPAP01160 153 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 GSTT2BP0CG30 244 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 SLC6A4P31645 630 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 RABGGTBP53611 331 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 ADAM8P78325 824 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 TUBA3CQ13748 450 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 SIRPB2Q5JXA9 342 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 GALNT13Q8IUC8 556 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 SLC35F5Q8WV83 523 aa13.66□□□□□ -0.22
VTI1B-204ENST00000554659 ZNF541Q9H0D2 1346 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 ZNF487B1APH4 448 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 BTBD19C9JJ37 291 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 CLIC1O00299 241 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 PDCD5O14737 125 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 NFATC1O95644 943 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 SERPINA3P01011 423 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 SLC35G6P0C7Q6 338 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 EFNA1P20827 205 aaPredicted RBP13.65□□□□□ -0.22
VTI1B-204ENST00000554659 ATP4BP51164 291 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 AP2S1P53680 142 aaPredicted RBP13.65□□□□□ -0.22
VTI1B-204ENST00000554659 SLC39A4Q6P5W5 647 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 SCAMP5Q8TAC9 235 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 MIPEPQ99797 713 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 SLC39A3Q9BRY0 314 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 AASSQ9UDR5 926 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 A0A1W2PRB8 838 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 FLT3LGP49771 235 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 DSC3Q14574 896 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 MOGQ16653 247 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 LGI4Q8N135 537 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 CPA6Q8N4T0 437 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 PRICKLE1Q96MT3 831 aaPredicted RBP13.65□□□□□ -0.22
VTI1B-204ENST00000554659 MTERF1Q99551 399 aaKnown RBP13.65□□□□□ -0.22
VTI1B-204ENST00000554659 MED11Q9P086 117 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 VPS29Q9UBQ0 182 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 GAD2Q05329 585 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 TIGD5Q53EQ6 642 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 ATXN7L2Q5T6C5 722 aaPredicted RBP13.65□□□□□ -0.22
VTI1B-204ENST00000554659 SLITRK4Q8IW52 837 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 ZMIZ2Q8NF64 920 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 SIGLEC10Q96LC7 697 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 KCTD7Q96MP8 289 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 MGME1Q9BQP7 344 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 MRM3Q9HC36 420 aaKnown RBP13.65□□□□□ -0.22
VTI1B-204ENST00000554659 EVA1BQ9NVM1 165 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 DNAAF2Q9NVR5 837 aaKnown RBP13.65□□□□□ -0.22
VTI1B-204ENST00000554659 FBXW2Q9UKT8 454 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 TMED5Q9Y3A6 229 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 CPQQ9Y646 472 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 LOC100130705A0A1B0GUX0 176 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 HOXD13P35453 343 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 PSMD8P48556 350 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 TUBA3EQ6PEY2 450 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 OR10H4Q8NGA5 316 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 GEMIN6Q8WXD5 167 aaKnown RBP13.65□□□□□ -0.22
VTI1B-204ENST00000554659 DDX1Q92499 740 aaKnown RBP13.65□□□□□ -0.22
VTI1B-204ENST00000554659 SEC14L1Q92503 715 aa13.65□□□□□ -0.22
VTI1B-204ENST00000554659 AURKBQ96GD4 344 aaPredicted RBP13.65□□□□□ -0.22
VTI1B-204ENST00000554659 ELAC1Q9H777 363 aaKnown RBP13.65□□□□□ -0.22
VTI1B-204ENST00000554659 IGFALSP35858 605 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 GNALP38405 381 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 MAGEA12P43365 314 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 IDNKQ5T6J7 187 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 NPAS4Q8IUM7 802 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 ARMC10Q8N2F6 343 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 OR2L3Q8NG85 312 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 DNAJA4Q8WW22 397 aaPredicted RBP13.64□□□□□ -0.23
VTI1B-204ENST00000554659 ZUFSPQ96AP4 578 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 ZNF641Q96N77 438 aaPredicted RBP13.64□□□□□ -0.23
VTI1B-204ENST00000554659 WRAP53Q9BUR4 548 aaKnown RBP13.64□□□□□ -0.23
VTI1B-204ENST00000554659 EFCAB11Q9BUY7 163 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 SLC32A1Q9H598 525 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 OSER1Q9NX31 292 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 FZD4Q9ULV1 537 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 ERVW-1Q9UQF0 538 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 PRELID1Q9Y255 219 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 APODP05090 189 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 CLUP10909 449 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 ENGP17813 658 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 XKP51811 444 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 DNAJB13P59910 316 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 HMGCS1Q01581 520 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 GALNT2Q10471 571 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 GRSF1Q12849 480 aaKnown RBP eCLIP13.64□□□□□ -0.23
VTI1B-204ENST00000554659 C1orf189Q5VU69 101 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 LINGO2Q7L985 606 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 SPAG16Q8N0X2 631 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 OR5T3Q8NGG3 340 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 COMMD4Q9H0A8 199 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 SPATA7Q9P0W8 599 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 SPIN1Q9Y657 262 aaPredicted RBP13.64□□□□□ -0.23
VTI1B-204ENST00000554659 ENPP3O14638 875 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 PRAMEF12O95522 483 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 VIPP01282 170 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 PCCBP05166 539 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 CSTF2P33240 577 aaKnown RBP eCLIP13.64□□□□□ -0.23
VTI1B-204ENST00000554659 EFR3AQ14156 821 aa13.64□□□□□ -0.23
VTI1B-204ENST00000554659 ZNF829Q3KNS6 432 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms