RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 PVRP15151 417 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 UGT1A6P19224 532 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 UGT1A1P22309 533 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 UGT1A4P22310 534 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 PRDX3P30048 256 aaKnown RBP7.02□□□□□ -1.29
ATXN3-219ENST00000553488 PTGER4P35408 488 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 SPAM1P38567 509 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 FOLR3P41439 243 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 TDGF1P3P51864 188 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 TAS2R40P59535 323 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 KLHL30Q0D2K2 578 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 GTF3C1Q12789 2109 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 PDK2Q15119 407 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 TESK1Q15569 626 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 ZXDCQ2QGD7 858 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-219ENST00000553488 ZNF658BQ4V348 819 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-219ENST00000553488 BCL7AQ4VC05 210 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 ZFYVE27Q5T4F4 411 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 B3GNTL1Q67FW5 361 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-219ENST00000553488 RHBDD2Q6NTF9 364 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 ARMC6Q6NXE6 501 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 FAM151BQ6UXP7 276 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 B4GALNT4Q76KP1 1039 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 GDF7Q7Z4P5 450 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 NT5DC3Q86UY8 548 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 FJX1Q86VR8 437 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 LILRA3Q8N6C8 439 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-219ENST00000553488 CCNYQ8ND76 341 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 OR2L2Q8NH16 312 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 SPATA22Q8NHS9 363 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 FAR1Q8WVX9 515 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 ITLN2Q8WWU7 325 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-219ENST00000553488 TTC25Q96NG3 672 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 TRAPPC9Q96Q05 1148 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 TRIM8Q9BZR9 551 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 UGT1A7Q9HAW7 530 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 UGT1A10Q9HAW8 530 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 UGT1A8Q9HAW9 530 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 SLC6A20Q9NP91 592 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 REV1Q9UBZ9 1251 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 CDYLQ9Y232 598 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 PTRH2Q9Y3E5 179 aaKnown RBP7.02□□□□□ -1.29
ATXN3-219ENST00000553488 KLF2Q9Y5W3 355 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-219ENST00000553488 ACANP16112 2415 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 ABCA2Q9BZC7 2435 aa7.02□□□□□ -1.29
ATXN3-219ENST00000553488 GLYATL1P3A0A0U1RQE8 302 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 LOC285095A0A1B0GVY8 99 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 GSAPA4D1B5 854 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 AGPSO00116 658 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 ALOX12BO75342 701 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 HBQ1P09105 142 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 SLC35G4P0C7Q5 338 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 ITGAXP20702 1163 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 AGXTP21549 392 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 NDUFS1P28331 727 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 OTUD4Q01804 1114 aaKnown RBP7.01□□□□□ -1.29
ATXN3-219ENST00000553488 PRKAA1Q13131 559 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 ART3Q13508 389 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 ITGA9Q13797 1035 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 ZNF169Q14929 603 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-219ENST00000553488 SLC9A5Q14940 896 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 ZIC1Q15915 447 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 HADHQ16836 314 aaKnown RBP7.01□□□□□ -1.29
ATXN3-219ENST00000553488 DEFB110Q30KQ9 67 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 FNBP1LQ5T0N5 605 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 C1orf189Q5VU69 101 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 SLC9A4Q6AI14 798 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 ZNF324BQ6AW86 544 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-219ENST00000553488 KDELC1Q6UW63 502 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 DET1Q7L5Y6 550 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 THAP5Q7Z6K1 395 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 DAAM2Q86T65 1068 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 ATG4DQ86TL0 474 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-219ENST00000553488 C19orf47Q8N9M1 422 aaKnown RBP7.01□□□□□ -1.29
ATXN3-219ENST00000553488 ACVR1CQ8NER5 493 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 OR4E2Q8NGC2 313 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 PIWIL2Q8TC59 973 aaKnown RBP7.01□□□□□ -1.29
ATXN3-219ENST00000553488 PROKR1Q8TCW9 393 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 COG1Q8WTW3 980 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 RAPGEF5Q92565 580 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 RELTQ969Z4 430 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 LINC00615Q96LM1 132 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-219ENST00000553488 ZNF830Q96NB3 372 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-219ENST00000553488 AGAP3Q96P47 875 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 RNF157Q96PX1 679 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 SRPK1Q96SB4 655 aaKnown RBP7.01□□□□□ -1.29
ATXN3-219ENST00000553488 C17orf62Q9BQA9 187 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 CHRNA10Q9GZZ6 450 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 KLHL25Q9H0H3 589 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 TRABDQ9H4I3 376 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 GLOD4Q9HC38 313 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 FAM60AQ9NP50 221 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 SLC22A11Q9NSA0 550 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 COPG2Q9UBF2 871 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 ACSL5Q9ULC5 683 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 NENFQ9UMX5 172 aa7.01□□□□□ -1.29
ATXN3-219ENST00000553488 SCN2AQ99250 2005 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 A0A0A6YYK5 440 aaPredicted RBP7□□□□□ -1.29
ATXN3-219ENST00000553488 A0A1B0GUH1 482 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms